KEGG   Citrus x clementina (clementine): CICLE_v10024776mg
Entry
CICLE_v10024776mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CICLE_v10024776mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cic03009]
    CICLE_v10024776mg
Ribosome biogenesis [BR:cic03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    CICLE_v10024776mg
SSDB
Motif
Pfam: Nrap_D5 Nrap_D4 Nrap_D3 Nrap Nrap_D2 Nrap_D6
Other DBs
NCBI-GeneID: 18036971
NCBI-ProteinID: XP_006425669
UniProt: V4UHS9
LinkDB
Position
Unknown
AA seq 1055 aa
MDADTTVTLTDPMDYKVEELLKEVHFARAPAITKLVDDTVSAVRKSISKIPDAFPVTADL
APGFVRDIGADKVEFKFNKPKTFKIGGSYSINCVVKPAVNVDLFVGLPKECFHEKDYLNH
RYHAKRCLYLCVIKKHLKSSPSFDKVEWSAMQNEARKPVLVVYPAVKSVEAPGFFVRIIP
TAASLFNIAKLNLKRNNVRAFNQDGIPRATPKYNSSILEDMFLEDNAEYVEKTISRWKEL
GEALILLKVWARQRSSIYVHDCLNGYLISILLSYLVSLDKINNSMKALQILRVVLDFIAT
SKLWNRGLYFPPKGQIGVSKEEKLQYKEAFPVVICDPSAQVNLAFRMTSVGFCELQDEAA
STLQCMDKCGDGGFEETFFTKIDFPAKYDYCVRLNLRGHTEVHALGFCLDDECWRLYEQK
VHSLLNQGLVDRAKSIRVTWRNSPSEWNIENGLAVLDREPLLVGISVSSLEKLFRIVDIG
PNAENKEEALRFRKFWGEKAELRRFKDGTIAESTVWESEQWTRHLILKGIIEYVLLRHLS
LSKENVVQIVDQLDFSLLHGAKDLVSFSASLLEAFEVLSKRLHLIEDIPLKISSVQPLDS
AFRFTSVFPPEPHPLANERHTVSRLHKLTPSCIQPLEVMIQLEGSGNWPMDHVAIEKTKS
AFLIKIGESLQNRWGMTCSATEDDADIFMSGYAFRLKILHERGLSLVKSENGNKAKRVYS
TDKILFIRGQHASMINGLQGRYPVFGPVVRVAKRWAASHLFSACLVEEAVELLVAYLFLK
PLPFNVPCSRVTGFLRFLRLLAEYDWTFSALVVDINNDFGPEDFKVINDNFMSSRKASEE
NVQNVNPALFLATAYDKASEAWTTCSPNFTELKRLVAYARSSANLLTKLILEDQTDSCRW
ECLFRTPLNNYDAVVLLHRDRLPYPRRLLFPSEVNRGRHVARVNASKAFGPFLVPEEMKG
SSEEVKNKMMVDFDPLRCFVGDVEKEYSKKLKLWYDSLGGDAIGLTWERVGSKKREREEA
PEEETDSIGVLKAVGELGKGFVRDIYFLKAPRLMS
NT seq 3168 nt   +upstreamnt  +downstreamnt
atggatgctgataccactgtcacgttaacggatccaatggactacaaagtagaagagctt
ttgaaagaagtccacttcgcccgagcacctgctattaccaagctcgtcgacgacaccgtg
tcggccgtaagaaaatcaatcagtaaaatccccgatgcctttccggttacggcggattta
gctcctggttttgtgagagacattggtgcagacaaagtagagttcaagtttaacaagccc
aaaacttttaaaattggcggtagttattcaataaattgtgtagtcaagcctgctgtgaat
gtggatctttttgttgggctgccaaaggagtgtttccatgagaaagattatcttaatcac
cggtatcatgccaaaaggtgcctttacctatgtgtaataaaaaaacatttgaaatcctcc
ccatcatttgataaggtggaatggtctgccatgcagaatgaggcccgaaaacctgtatta
gttgtctacccagccgtgaagtctgttgaggctcctggattttttgtaaggataattcct
acggcagcatccctgttcaacattgcaaagttgaacttgaagcggaacaatgttcgtgcc
tttaatcaagatggtattcctcgggctacacctaagtacaatagtagtattctggaagac
atgtttctggaggataatgcagaatatgttgagaaaactattagcagatggaaggaactg
ggagaggctttaatcttgctgaaggtttgggctcggcagagaagttcgatatatgttcac
gattgcttaaatggatatctaatttctatcttgttgtcataccttgtgagtctggataaa
attaacaattctatgaaagcgctgcagatacttcgtgttgttctagacttcattgccact
tcaaaattgtggaaccgtgggctttactttccaccaaaaggccagataggtgtttcaaag
gaggaaaaattgcaatataaggaagcatttcctgttgttatatgtgacccatccgctcaa
gtaaatctggcttttcggatgacaagtgttggattctgtgagctccaagatgaggctgct
tcaacacttcagtgcatggataaatgcggagatggtggatttgaggagacattttttacc
aagattgactttcctgctaaatatgactactgtgttagattaaatctgaggggacatact
gaggttcatgcattgggattttgtttggatgatgaatgttggagattgtatgagcagaag
gtgcatagtttgctgaatcaaggattggttgacagagcaaagtccattcgtgttacttgg
agaaactctccctcggaatggaatatagaaaatggcttagcagtacttgatagggagcca
ttacttgttggtatttcagtgagctctcttgagaaactttttaggatagttgatattggt
ccaaatgccgaaaataaagaagaggctctcaggttccgaaagttttggggggagaaggca
gagcttcgcagatttaaagatggtacaattgcggaaagcacagtttgggaaagtgagcag
tggacgagacacctcattttaaaaggaattatcgagtatgtgcttctgcgtcatctttct
ctatcgaaagaaaacgtagtgcaaatagttgatcaacttgacttctctctgcttcatgga
gctaaagatcttgtatcgttttctgcaagtttgcttgaagcatttgaagttttatcaaag
cgcttgcatcttattgaagatatccctttgaagatatctagtgtgcagcctttggactcg
gctttcaggttcacatctgtcttccctcctgaacctcacccgctggccaatgaaagacat
actgtttcaagactacataagctcaccccatcatgcattcagccactggaagttatgatt
cagttagaaggctctgggaattggccaatggaccatgtagcaatagagaaaactaaatct
gctttccttattaaaattggagagagtctccagaatagatgggggatgacatgtagtgct
accgaggatgatgctgatattttcatgtctggatatgcgtttcgtcttaagattttgcat
gagagagggttgagtttagtgaaaagtgaaaatggaaataaagcaaagcgggtttattca
acagacaagatactttttattcgtggtcagcatgcaagcatgattaatgggttacagggt
cgttacccggtatttggcccagttgttagggttgcaaagaggtgggctgcttcacatttg
ttttcagcttgcttggtagaggaggctgttgaactattggttgcgtatctgtttttgaag
cctttaccatttaatgttccgtgctctcgggttactggattcttaaggtttctgcgtctt
ctagctgagtatgattggaccttttctgctttggttgttgacataaataatgactttggc
ccagaggactttaaagtgattaacgataacttcatgtcaagtagaaaagcatctgaagaa
aatgtgcaaaatgtaaacccagcattgtttctggcaactgcttatgacaaggcatctgaa
gcttggaccacatgctcgccaaactttacggagctaaagaggctagtagcttatgctcga
agcagtgcaaacttattgactaaactcatactggaggatcagactgattcttgcagatgg
gagtgccttttccggacaccgttgaacaattatgatgcagtggttcttctccacagggac
aggttaccttacccacgtcgccttcttttcccgtccgaagtaaacagagggaggcatgtg
gctcgtgtaaatgctagcaaggcttttggcccattcttggtgcctgaggaaatgaaggga
agctcagaggaagttaaaaataagatgatggtagactttgatcctttaagatgctttgtt
ggggacgtagagaaagagtactcaaaaaaattgaagttgtggtatgattctttgggaggt
gacgccatcggactaacatgggagagggttgggtcaaagaaacgcgaacgagaggaagca
cctgaagaagaaacagattcaattggtgtgctaaaagctgtgggcgaactggggaaaggg
ttcgtgagggatatttattttctcaaggccccaaggctgatgagttaa

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