Citrus x clementina (clementine): CICLE_v10024776mg
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Entry
CICLE_v10024776mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CICLE_v10024776mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10024776mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CICLE_v10024776mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
18036971
NCBI-ProteinID:
XP_006425669
UniProt:
V4UHS9
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MDADTTVTLTDPMDYKVEELLKEVHFARAPAITKLVDDTVSAVRKSISKIPDAFPVTADL
APGFVRDIGADKVEFKFNKPKTFKIGGSYSINCVVKPAVNVDLFVGLPKECFHEKDYLNH
RYHAKRCLYLCVIKKHLKSSPSFDKVEWSAMQNEARKPVLVVYPAVKSVEAPGFFVRIIP
TAASLFNIAKLNLKRNNVRAFNQDGIPRATPKYNSSILEDMFLEDNAEYVEKTISRWKEL
GEALILLKVWARQRSSIYVHDCLNGYLISILLSYLVSLDKINNSMKALQILRVVLDFIAT
SKLWNRGLYFPPKGQIGVSKEEKLQYKEAFPVVICDPSAQVNLAFRMTSVGFCELQDEAA
STLQCMDKCGDGGFEETFFTKIDFPAKYDYCVRLNLRGHTEVHALGFCLDDECWRLYEQK
VHSLLNQGLVDRAKSIRVTWRNSPSEWNIENGLAVLDREPLLVGISVSSLEKLFRIVDIG
PNAENKEEALRFRKFWGEKAELRRFKDGTIAESTVWESEQWTRHLILKGIIEYVLLRHLS
LSKENVVQIVDQLDFSLLHGAKDLVSFSASLLEAFEVLSKRLHLIEDIPLKISSVQPLDS
AFRFTSVFPPEPHPLANERHTVSRLHKLTPSCIQPLEVMIQLEGSGNWPMDHVAIEKTKS
AFLIKIGESLQNRWGMTCSATEDDADIFMSGYAFRLKILHERGLSLVKSENGNKAKRVYS
TDKILFIRGQHASMINGLQGRYPVFGPVVRVAKRWAASHLFSACLVEEAVELLVAYLFLK
PLPFNVPCSRVTGFLRFLRLLAEYDWTFSALVVDINNDFGPEDFKVINDNFMSSRKASEE
NVQNVNPALFLATAYDKASEAWTTCSPNFTELKRLVAYARSSANLLTKLILEDQTDSCRW
ECLFRTPLNNYDAVVLLHRDRLPYPRRLLFPSEVNRGRHVARVNASKAFGPFLVPEEMKG
SSEEVKNKMMVDFDPLRCFVGDVEKEYSKKLKLWYDSLGGDAIGLTWERVGSKKREREEA
PEEETDSIGVLKAVGELGKGFVRDIYFLKAPRLMS
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgataccactgtcacgttaacggatccaatggactacaaagtagaagagctt
ttgaaagaagtccacttcgcccgagcacctgctattaccaagctcgtcgacgacaccgtg
tcggccgtaagaaaatcaatcagtaaaatccccgatgcctttccggttacggcggattta
gctcctggttttgtgagagacattggtgcagacaaagtagagttcaagtttaacaagccc
aaaacttttaaaattggcggtagttattcaataaattgtgtagtcaagcctgctgtgaat
gtggatctttttgttgggctgccaaaggagtgtttccatgagaaagattatcttaatcac
cggtatcatgccaaaaggtgcctttacctatgtgtaataaaaaaacatttgaaatcctcc
ccatcatttgataaggtggaatggtctgccatgcagaatgaggcccgaaaacctgtatta
gttgtctacccagccgtgaagtctgttgaggctcctggattttttgtaaggataattcct
acggcagcatccctgttcaacattgcaaagttgaacttgaagcggaacaatgttcgtgcc
tttaatcaagatggtattcctcgggctacacctaagtacaatagtagtattctggaagac
atgtttctggaggataatgcagaatatgttgagaaaactattagcagatggaaggaactg
ggagaggctttaatcttgctgaaggtttgggctcggcagagaagttcgatatatgttcac
gattgcttaaatggatatctaatttctatcttgttgtcataccttgtgagtctggataaa
attaacaattctatgaaagcgctgcagatacttcgtgttgttctagacttcattgccact
tcaaaattgtggaaccgtgggctttactttccaccaaaaggccagataggtgtttcaaag
gaggaaaaattgcaatataaggaagcatttcctgttgttatatgtgacccatccgctcaa
gtaaatctggcttttcggatgacaagtgttggattctgtgagctccaagatgaggctgct
tcaacacttcagtgcatggataaatgcggagatggtggatttgaggagacattttttacc
aagattgactttcctgctaaatatgactactgtgttagattaaatctgaggggacatact
gaggttcatgcattgggattttgtttggatgatgaatgttggagattgtatgagcagaag
gtgcatagtttgctgaatcaaggattggttgacagagcaaagtccattcgtgttacttgg
agaaactctccctcggaatggaatatagaaaatggcttagcagtacttgatagggagcca
ttacttgttggtatttcagtgagctctcttgagaaactttttaggatagttgatattggt
ccaaatgccgaaaataaagaagaggctctcaggttccgaaagttttggggggagaaggca
gagcttcgcagatttaaagatggtacaattgcggaaagcacagtttgggaaagtgagcag
tggacgagacacctcattttaaaaggaattatcgagtatgtgcttctgcgtcatctttct
ctatcgaaagaaaacgtagtgcaaatagttgatcaacttgacttctctctgcttcatgga
gctaaagatcttgtatcgttttctgcaagtttgcttgaagcatttgaagttttatcaaag
cgcttgcatcttattgaagatatccctttgaagatatctagtgtgcagcctttggactcg
gctttcaggttcacatctgtcttccctcctgaacctcacccgctggccaatgaaagacat
actgtttcaagactacataagctcaccccatcatgcattcagccactggaagttatgatt
cagttagaaggctctgggaattggccaatggaccatgtagcaatagagaaaactaaatct
gctttccttattaaaattggagagagtctccagaatagatgggggatgacatgtagtgct
accgaggatgatgctgatattttcatgtctggatatgcgtttcgtcttaagattttgcat
gagagagggttgagtttagtgaaaagtgaaaatggaaataaagcaaagcgggtttattca
acagacaagatactttttattcgtggtcagcatgcaagcatgattaatgggttacagggt
cgttacccggtatttggcccagttgttagggttgcaaagaggtgggctgcttcacatttg
ttttcagcttgcttggtagaggaggctgttgaactattggttgcgtatctgtttttgaag
cctttaccatttaatgttccgtgctctcgggttactggattcttaaggtttctgcgtctt
ctagctgagtatgattggaccttttctgctttggttgttgacataaataatgactttggc
ccagaggactttaaagtgattaacgataacttcatgtcaagtagaaaagcatctgaagaa
aatgtgcaaaatgtaaacccagcattgtttctggcaactgcttatgacaaggcatctgaa
gcttggaccacatgctcgccaaactttacggagctaaagaggctagtagcttatgctcga
agcagtgcaaacttattgactaaactcatactggaggatcagactgattcttgcagatgg
gagtgccttttccggacaccgttgaacaattatgatgcagtggttcttctccacagggac
aggttaccttacccacgtcgccttcttttcccgtccgaagtaaacagagggaggcatgtg
gctcgtgtaaatgctagcaaggcttttggcccattcttggtgcctgaggaaatgaaggga
agctcagaggaagttaaaaataagatgatggtagactttgatcctttaagatgctttgtt
ggggacgtagagaaagagtactcaaaaaaattgaagttgtggtatgattctttgggaggt
gacgccatcggactaacatgggagagggttgggtcaaagaaacgcgaacgagaggaagca
cctgaagaagaaacagattcaattggtgtgctaaaagctgtgggcgaactggggaaaggg
ttcgtgagggatatttattttctcaaggccccaaggctgatgagttaa
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