Citrus x clementina (clementine): CICLE_v10024784mg
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Entry
CICLE_v10024784mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CICLE_v10024784mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10024784mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10024784mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CICLE_v10024784mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CICLE_v10024784mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
18035926
NCBI-ProteinID:
XP_006427580
UniProt:
V4SPJ8
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MGLDARTFASCNNIPQYRKGNISMNAYSLSCEISSENGDSLPVLCSPDYYTEPLLNDLAK
REVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIVKFGRHEIVVYEDESSKPE
VGQGLNKAAEVTLFLQGRYLSLKLKEGDSDDFVKKMKERTERQGARFVSFDPVSGEWKFL
VVHFSRFGLSDEEEDDIMMDDATPVQNSLEMNGGEVSDVDEETQMDLSGPELSHSLPAHL
GLDPLKMKEMRMVMFQEEEEIDDFSGTPSWQQWSLGKEYIRPPLQNTAQRMSQRSSSPLA
RKTPVGLLEYHPGNSDSDSPGMILMAQQDKGMPLKKLKSDGFKLDLKHETPVTGSHSHNI
VDAGLFMGRAFRVGWGPNGILVHSGAPVGSNSRGVISSVINVEKVAIDKVVRDENDKVRK
ELVDFSFDAPLNLHKELNHETEEVEVGSYKLKLQKVVSNSLMLSEICRSYIDIIEAQLDV
PGVSSSARLVLMHQVMVWELIKVLFSERENGGQLRSEGDDNEEEMMQDIKDGPPEFDLEA
LPLIRRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVR
LACLLSQAGGSTVSRSDIAHQLDLWRVNGLDFKFIEKDRIRLYELLAGHIHSSLNDVTID
WKRFLGLLMWYQLPPETSLAIVFQTYQHLLEDGKAPLPVPIYVDEGPIDEPIDWSGNERY
DLSYYLMLLHASGESKFGSLKTMFNALSSTYDPLDYHMIWHQREVLAAVGVISSNDLQIL
DMGLVSQLLCQGKCHWAIYVVLHMPRCDDYPYLQATLIREILFQYCESWSSEESQRQFIE
ALGVPSEWLHEAMAVYYNYYGELSKALEHFLECANWQKAHSIFVTSVAHTLFLSANHSDV
WTLATSMESHKSEIENWDLGAGMYIVFYLIRSSLQEENNTMSDLNSLESKNAACKEFLVC
LKESLAVWGARLPTEARVAYSKMAEEICDLLLSDISQGPTRDAQLSCFDTVFSAPIPEDF
RSNHLQDAVSLFTCYLSEIAS
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgggattggatgcgagaacttttgcttcatgtaacaatatacctcaatatagaaaggga
aatatttcaatgaatgcttattcgctgtcttgtgagatttcgagtgagaatggagattcc
ttaccagttctgtgttctcctgattattatacggagcctttgttgaacgatttggctaaa
cgggaagtgattgatccgggttactctagtcgggtacctgatttcacagttggaaggttg
ggttatggatatgttaaatttcttgggaacactgacgtcagatggctagatttggatcaa
attgtgaagtttggtaggcatgagatagttgtttatgaagatgaaagttccaagcctgag
gttggtcagggccttaacaaggcagccgaagtgactttgtttctacaagggagatatttg
agtttaaaactaaaagaaggggattcagatgattttgttaagaaaatgaaagagaggacg
gagaggcaaggagctcggtttgtttcttttgaccctgtgagtggtgaatggaagttcttg
gttgttcatttcagtagatttggtttgagtgatgaggaggaggatgatataatgatggat
gatgctacaccagttcaaaattctttggagatgaatggtggagaggtatctgacgttgat
gaagaaacccaaatggatcttagtggaccggagctctctcattctcttcctgcacatctt
ggacttgaccctttaaagatgaaagaaatgagaatggtgatgtttcaggaagaggaggag
attgatgattttagtggaacaccctcatggcagcaatggtcccttggtaaagaatatata
agacctcctttgcagaatactgctcagagaatgagccaaaggtctagttcacctcttgca
cgaaaaactccagtaggtttgcttgagtaccaccctggtaattctgattcagactctcct
ggaatgattctgatggcccaacaggataagggcatgccactaaagaaattgaaatcagat
gggtttaagctggacctcaagcatgaaactccagttactggaagccattctcacaatata
gtcgatgcaggtttgttcatgggtagggcgtttcgtgtagggtggggaccaaatggcatc
cttgttcacagtggtgcaccagttggtagtaattctcggggggtaatatcatctgtaatc
aatgtagaaaaggttgcaatagacaaagtggtcagagatgaaaatgataaagtgagaaag
gaacttgttgatttttcctttgatgctccattaaatcttcataaggagttgaatcatgaa
acagaagaagttgaagttgggtcctataagctaaagcttcaaaaggttgtgtcaaatagc
ttaatgctttcagaaatttgtcggagctatatagacattattgaggcacagctagatgtg
cctggggtatcttcttctgctcgtttagttttgatgcaccaagtaatggtctgggaattg
ataaaagtactcttttctgaaagggaaaatggtggacaattaagatctgagggcgatgac
aatgaggaagagatgatgcaggatataaaggacggtcctcctgaatttgacctggaggca
cttcctcttattcgaagagcagagttcagttgttggttaaaagaaagtgtttgccaccga
gttcaagaggatgtaagctccttggatgagtccaattatcttaaacacatatttttactc
ctgacaggtcggcagttggattcatctgtggaactggctgcttctagaggggatgtgaga
ctggcttgtttgttaagtcaggctggtggatccacggtgagtcgttctgatattgcacac
cagcttgatctttggagagttaatggactggacttcaagttcattgagaaggataggatt
aggctttatgagctgcttgccggccatattcatagctcgttaaatgatgtaaccattgac
tggaagaggttcctgggattgttgatgtggtatcaactaccacctgaaacttcattggcc
attgtttttcaaacttatcaacaccttcttgaggatggaaaggctccattgccggttcca
atttatgtagacgaaggaccaattgatgagcctattgattggagtggaaatgaacgttat
gacctctcgtattatcttatgctccttcatgccagtggagagagtaaatttggctctcta
aaaaccatgtttaatgccctctcttcaacatatgatccacttgactaccatatgatctgg
catcaacgtgaagtgttagcagctgtgggtgttatcagttctaatgatcttcaaatactt
gacatgggacttgtctctcagcttctatgtcaagggaagtgtcattgggccatctatgtg
gtccttcacatgccccgctgtgatgattatccatatctgcaggctacccttatacgggaa
atcttgttccaatattgtgaatcttggagttcagaagaatcacaacgtcaatttattgag
gccttgggcgttccatcggagtggttgcatgaagcaatggcagtttactacaattactat
ggggaactctcaaaggcccttgaacacttccttgaatgtgcaaattggcaaaaagctcac
tccatttttgtaacttcagtggctcatacattatttttgtcagccaatcactcagatgtg
tggacactcgcaacttccatggagagccacaagtcagaaattgagaattgggacctggga
gctggaatgtacattgtgttttatttaataagaagttcattgcaggaagagaacaatact
atgagtgatctgaattctcttgagagcaaaaatgctgcttgtaaggaattccttgtttgt
ttgaaggagtcattggcagtttggggcgctagattacccactgaggccagagtagcatat
tcaaagatggcagaggagatatgcgacttgcttctatctgatattagccagggtccaacc
cgtgatgctcagctaagctgcttcgatacagtctttagtgctccgataccagaagacttc
cgctcaaatcatttgcaggatgcagtatctctttttacatgttatctgtccgagatagct
tcttag
DBGET
integrated database retrieval system
