Citrus x clementina (clementine): CICLE_v10024925mg
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Entry
CICLE_v10024925mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CICLE_v10024925mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10024925mg
Membrane trafficking [BR:
cic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
CICLE_v10024925mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Urb2
Motif
Other DBs
NCBI-GeneID:
18035787
NCBI-ProteinID:
XP_006425403
UniProt:
V4RV84
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MMVDGVEDEEKWLAAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPQKY
YQLYMRAFDELRKLEMFFKEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQISRDKLPDIGSEYEGDADTVNDAMEFVL
QNFTEMNKLWVRMQHQGPAREKDKREKERSELRDLVGKNLHVLSQIEGVDLDTYKETVLP
RVLEQVVNCKDEIAQCYLMDCIIQVFPDEYHLQTLEILLGAFPQLQPSVDIKTVLSRLME
RLSNYAASSTEVLPEFLQVEAFSKLNNAIGKVIEAQADMPILGAVTLYSSLLTFTLHVHP
DRLDYADQVLGACVKKLSGEGKLEDNRATKQIVALLSAPLDKYNDIVTVLKLSNYPSVME
YVDSETNKVMAMVIIQSIMKNNTQISTADKVEALFELIKGLIRDLDGAAHDQVDEDDFKE
EQNSVARLIQMLQNDDTEEMFKIICTVRKHILTGGPKRLPFTVPPLVFSSLKLVRQLQGP
EENPFGEEGSTTPKKVFQLLNQTIETLYGVPAPELALRLYLQCAEAANDSDLEPVAYEFF
TQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQDNMKDGERVLLCLKRALRIANAAQQMSNATRGSTGSVTLFVEILN
KYVYFFEKGNTQINAAAIQSLIELITAEMQSDSNSPDPAADAFFASTLRYIQFQKQKGGA
VGEKYEPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcgatggagtcgaagatgaggagaaatggcttgccgccggaatcgctggcctc
caacagaatgcgttctacatgcatcgtgctctggactcgaacaatctgagagatgcttta
aaatattctgctcagatgttatctgagcttaggacttcgaagctttctcctcagaagtac
tatcaactctacatgcgagcatttgatgagttaaggaagctggagatgttctttaaggaa
gagactcgccgtggttgctctattattgatctgtatgagctcgtgcagcatgctggcaat
atattgcctagattgtatcttctctgcacagtgggatcagtatatattaaatctaaggaa
gcacccgctaaggatgttctaaaagatcttgttgaaatgtgccgcggcattcagcatcct
gtacgtgggctcttcctgaggagttacctctcgcaaattagcagggataaattacctgat
attggttcagagtatgaaggggatgctgacactgtaaacgatgctatggagtttgtactt
caaaacttcacagagatgaacaaattatgggtgcggatgcaacatcagggacctgcccgg
gagaaggacaaacgggagaaagaaaggagcgagctacgtgatcttgttgggaagaacctg
catgtcctcagtcagatagagggtgtcgaccttgatacatacaaagaaactgtgcttccc
agagttctcgagcaggttgtcaattgtaaagatgagattgcacagtgctacttgatggac
tgcatcatccaagtctttcctgatgagtaccatttgcaaactcttgaaatattgttgggg
gctttcccacagcttcaaccatctgttgacatcaagacagtcctatctcgtttgatggaa
agactttcaaactatgctgcttcaagcacagaagttttacctgagttcttgcaagtagaa
gctttttccaagttgaacaatgccattgggaaggtgatagaagctcaggctgacatgcct
atccttggagctgtaactttatattcatctcttcttacgtttactctccatgtacaccct
gatcggcttgattatgcagatcaagtgctgggagcttgtgttaaaaaactttcgggcgaa
ggaaaacttgaagacaacagagcaacaaagcagattgttgcgcttttaagtgctccactg
gacaaatacaatgacattgttactgtactaaaactttcaaactatcccagtgtgatggaa
tacgttgacagtgaaaccaataaagtcatggcaatggttattattcagagcattatgaaa
aacaatactcagatttcgactgctgacaaggttgaggcattgtttgaattaattaaaggg
cttatcagggacttggatggggctgctcatgatcaggttgatgaagatgatttcaaggaa
gagcagaattctgttgcacgtcttatccagatgcttcaaaatgatgatacagaggaaatg
tttaagatcatatgtacagtaaggaaacatattcttactggaggacccaaacgtctgcca
tttactgttcctccccttgtgttttcttctctgaagttggttcggcagctccaaggtcca
gaagaaaatccttttggagaagagggatcaactacacctaagaaagttttccagctttta
aaccagactattgagaccctatatggtgttccagcacctgaattggcattgcggttgtac
ttgcagtgtgctgaggctgcaaatgactctgatctagaacctgtggcttatgaatttttc
actcaagcatatatcctgtatgaagaagaaatttcagattccagagcacaagtgacagca
atacatctaataatagggactctccagaggatgcacgtatttggtgtagaaaacagggat
acattaacacacaaggctacagggtattctgcaaagctcttaaagaagcctgatcagtgc
agagctgtctatgcatgctcacatctcttctgggttgatgatcaggataacatgaaagat
ggagagagggtcctgctctgtctcaagcgtgcactaagaatagcaaatgctgctcaacaa
atgtctaatgccacacgaggtagcactggatcagtcacactttttgtcgagatactgaac
aagtacgtttatttctttgagaagggtaacacacagatcaatgctgctgcaatccagagc
ctgattgagctgattacggcagagatgcaaagcgactctaattcaccggatccagctgca
gatgctttctttgcaagcacattgcgatacatacagttccagaaacagaaaggtggtgca
gtgggtgaaaagtatgagcctatcaaggtttga
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