Citrus x clementina (clementine): CICLE_v10025066mg
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Entry
CICLE_v10025066mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K15174
RNA polymerase II-associated factor 1
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10025066mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
CICLE_v10025066mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
18035970
NCBI-ProteinID:
XP_006426877
UniProt:
V4SHM5
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MASYRPFPQPPQSSFPPPPPPNQNPSQPPPPPQQQQQQQRPNPYSQNWGGYSNTGGGAQQ
HYHQPYSYAQPPPPPPPESSYPPPPPPPPPPPPTQQQTQPSMYYSSNQYNQNSMYPPMQP
PLPPPPPSSPPPSSSIPPPPPPGSPPPPPPKDVEGRDTGTSDRDKRASKEVSRHDPGHSK
QHRPPVPPPGVKKVNGGSGRVETEEERRIRKKREYEKHRQEEKHRLQMKESQNVVMQKSQ
MVASGKGGHGSMVGSRMGDRRAAPLLSGERTENRLKKPTTFLCKLKFRNELPEPSAQPKL
MALKKDKDRFTRYTFSSLEKNYKPQLHVEPDLGIPLDLLDLSVYNPPSVRPPLDPEDEEL
LRDDEVVTPVKKDGIKRKERPTDKGVSWLVKTQYISPLSMESARQSLTEKQAKELREMKG
GRSILENLNDRERQIKEIEASFEACKLRPIHATNKNLQPVEILPLLPDFERYDDQFVAAT
FDGAPTADSEIYSKMDKSVRDAHESRAIMKSYVATGSDSANPEKFLAYMVPSVNELSKDM
YDENEDVSFSWVREYHWDVRGDDADDPTTYLVSFDDDEARYVPLPTKLNLRKKRAIEGRS
NDEVEHFPIPSSIAVRRRANVTAIELKEQGAYSNSKGNSSSSKMGRVDSQEDLERSHNGS
RQQDPYQSSGAEDDMYD
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttacaggccattcccacaaccaccgcaatcgtcattcccgccaccacctcct
ccaaaccaaaacccttcacagccaccgccgccacctcaacagcaacaacaacaacaaagg
ccaaacccttactctcaaaactggggtggttatagtaatactggtggtggtgctcagcaa
cattatcaccaaccatactcatatgcacaaccgccaccacccccgccaccggaatcttca
tacccacctccgcctccccctccccctccaccaccaccaacccaacaacagacacaacct
tcaatgtattattcaagtaatcagtataatcaaaattcaatgtatccaccaatgcagcca
ccacttccacctccaccaccttcgtctccgccacccagctcgtcaatcccacccccgcca
cctcctggttctcccccgcctcctccgccgaaggacgttgaggggagagatactggaacg
agtgatcgcgataagagggcatctaaggaggtttctaggcatgatcctggtcattcgaag
caacacaggccaccagttccaccacctggggtgaagaaggtgaatgggggttcagggagg
gtggagacagaggaggagaggcggataaggaagaagagggagtatgagaagcataggcag
gaggaaaagcataggctacaaatgaaggagtctcagaatgtggttatgcagaagagtcag
atggtggcttctgggaaaggagggcatgggtcaatggtagggtcaaggatgggggataga
agagctgcaccgcttttgagtggtgagaggactgagaataggttgaagaagccaaccacg
ttcttgtgcaagttgaaatttcgaaatgaacttcctgagccaagtgcacagccaaagctt
atggcgctgaagaaagataaagatcgttttacaagatacacattctcatcgttggagaaa
aattacaagccccaactacatgttgagccagatctcgggataccacttgacctacttgac
cttagtgtatacaaccctcccagtgttagaccacctcttgatccagaggatgaggaattg
ttgcgagatgatgaagtagttaccccagtgaaaaaagatggtataaaaagaaaagaacga
cctacggataaaggtgtttcttggctagtcaaaacgcagtatatatctcctcttagcatg
gaatcagcaagacagtctttgactgaaaaacaagcaaaagaactgcgagaaatgaagggg
ggccgtagcatattggaaaaccttaatgatagggagagacaaattaaggaaattgaggct
tcctttgaggcatgcaagttgcgtcctattcacgcaaccaataaaaatttacagcctgtt
gagattttgcctctgttacctgattttgagcgatatgatgatcaatttgttgcagcgaca
tttgatggtgctcccacagcggattctgaaatctacagcaagatggacaaatctgttcga
gatgcccacgaatcacgggctattatgaaaagttatgtggcaacaggctcagattctgct
aacccagagaaattcttggcgtatatggtcccttctgtaaatgagctatcaaaggatatg
tatgatgagaatgaagacgtctcattttcttgggttcgcgagtaccactgggatgtgcgg
ggtgatgatgcagatgacccaaccacataccttgtttcgtttgatgatgatgaagctcgc
tacgtgcctctgcccacaaagcttaatttgaggaagaagagggcaatagagggaagatct
aatgacgaagtcgaacattttcccattccttcaagtattgctgtaaggcgaagagcgaat
gtaactgcaatagaattgaaggagcaaggggcttattcaaattcaaagggtaacagttcg
agttcaaagatgggaagggtagattcccaagaggatcttgaaagatcacataatggttca
cggcaacaagacccctatcaatcaagtggagcagaagatgacatgtatgattga
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