Citrus x clementina (clementine): CICLE_v10025074mg
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Entry
CICLE_v10025074mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CICLE_v10025074mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CICLE_v10025074mg
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Paralog
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
18037019
NCBI-ProteinID:
XP_006426234
UniProt:
V4UJD8
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MEKVRWKRKGSLVAALLLMFFIGVSSEKIPVSNPRELKTSLGVQLNTKHRRLVVMDNGLV
QVTLSNPEGEVIGIKYNEIDNVLETQNEEDNRGYWDVVWYEPEKQGSYDKLIATDFKVIM
QDENQVEVSFTRTWNISLRGSLAPLNVDKRYIMRRGVSGFYFYAIMERKEGWPDVDMDQI
RTVFKLQQNKFHFMAISNDRQRIMPMPEDRATGQPLAYPEAVLLTDPINPDLRGEVDDKY
QYSSEDKDIRVHGWISSDPPVGFWMITPSDEFRSGGPNKQDLTSHVGPVVLSMFTSTHYA
GKEINTEFRNGEPWKKVFGPALVYLNSVSSEEKPLNLWEDAKRQMMVEVRKWPYNFPESV
DFPKRNQRGGVFGQLRVHDRYISNRLMWADSAYVGLAAPGGVGSWERDSKGYQFWTKANK
RGYFSIKNVRQGDYNLYAWIPGIVGDYKYSANITVRAGSNINLGVLVYEPPRKGPTLWEI
GIPDRSAAEFFVPDPYPTLANQLYTNHPEKFRQYGLWERYVDLYRNDDLEYTVGDSYHAK
DWFFAHVTRDVGNRTYKPTTWRIIFELKHLNNNGHYTLQLALASATDSDLHVRFNNPNAD
PPHFATGTIGKDNAIARHGIHGLYRLYSIDVPSVLLNRGRNTIYLTQSRSRSPFQGVLYD
YIRLEGPPRT
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggttaggtggaaacgaaaagggagtttggttgctgcattacttctcatgttc
ttcatcggagttagttccgagaagatcccagtaagcaacccccgagaattgaagacttcg
cttggagtccaactaaataccaaacaccgacgactggtggtgatggataatggccttgtg
caagtcactttgtcaaatccagagggtgaagtcattggaataaaatataatgaaattgac
aatgtactagagacacagaatgaagaagataatcgagggtattgggacgtcgtttggtac
gagccggaaaaacaaggttcctatgacaaattaattgcaacggattttaaggtgattatg
caagatgaaaaccaagtagaggtatcattcacgagaacatggaacatttccctccgtggg
tctctagctcccttaaatgttgataaaaggtacataatgcggcgtggcgtctcgggcttt
tacttttacgccataatggaacgcaaagaagggtggcctgacgtggacatggatcaaatt
aggactgttttcaagctccaacaaaacaagtttcacttcatggcaatatcaaacgatagg
caaagaatcatgccaatgcctgaagacagggcaaccggtcagccacttgcctatcctgag
gctgttctcctgacagatccaatcaacccagaccttagaggagaggtggacgacaagtac
cagtactcgagcgaggataaagatattcgggtccacggatggatatcctccgacccgccc
gttggattctggatgatcacaccaagcgacgagtttcgttcgggtggccccaacaaacaa
gacctaacttctcacgtgggccccgtcgtcctctcgatgttcaccagtactcattatgct
gggaaggaaataaatacagagttcagaaacggagagccgtggaagaaagtttttggtcct
gctcttgtttatcttaactctgtttcatccgaagaaaaaccccttaatctttgggaagat
gctaaacgccagatgatggtagaagttagaaaatggccatataatttccctgaatcagtg
gatttccctaaacgcaatcaaagaggaggagtctttggtcaattacgagtccacgacagg
tacatcagtaacagattgatgtgggcggactcggcttatgtgggattggctgcaccagga
ggtgtcggatcatgggagagagattccaagggttatcaattctggacaaaagcgaacaag
agagggtatttctcaattaaaaatgttcgacaaggggattataatttgtatgcgtggatc
cctggaattgttggtgactataaatatagtgccaatatcactgtcagagcaggttccaat
atcaacttgggagttcttgtttatgagccgcccagaaaaggtccgacattgtgggaaatc
ggcatccctgatcgctcagcagctgaattctttgtgccagacccttatccgacacttgcc
aaccaattatacactaatcatccagaaaagtttaggcaatacggattatgggagcgatat
gtagatttataccgaaatgatgatctcgaatatactgttggcgatagttatcacgcaaaa
gattggttctttgctcatgttaccagggatgtgggaaacaggacatacaaaccaaccaca
tggcggattatatttgaactaaagcacctgaacaacaatggccattacactcttcaattg
gctttggcatcggccacagactctgatttacatgttcgattcaacaacccaaacgcagat
ccgcctcattttgcaacggggacaataggaaaggacaatgccattgccagacatggaatc
cacggtctgtatagattatacagcattgatgtaccgagcgttttacttaaccgaggaaga
aatacaatctatctaactcagtcaaggagtagaagccctttccaaggagtactatatgac
tatattcgcctagaaggaccccctagaacttga
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