Citrus x clementina (clementine): CICLE_v10025114mg
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Entry
CICLE_v10025114mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03040
Spliceosome
cic04141
Protein processing in endoplasmic reticulum
cic04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10025114mg
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CICLE_v10025114mg
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CICLE_v10025114mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cic01009
]
CICLE_v10025114mg
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10025114mg
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10025114mg
03110 Chaperones and folding catalysts [BR:
cic03110
]
CICLE_v10025114mg
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10025114mg
03051 Proteasome [BR:
cic03051
]
CICLE_v10025114mg
03029 Mitochondrial biogenesis [BR:
cic03029
]
CICLE_v10025114mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cic04147
]
CICLE_v10025114mg
Protein phosphatases and associated proteins [BR:
cic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
CICLE_v10025114mg
Spliceosome [BR:
cic03041
]
Complex B
Other components
Prp19 complex
CICLE_v10025114mg
Complex C
Prp19-CDC5 complex
CICLE_v10025114mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
CICLE_v10025114mg
Chaperones and folding catalysts [BR:
cic03110
]
Heat shock proteins
HSP70 / DNAK
CICLE_v10025114mg
Membrane trafficking [BR:
cic04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
CICLE_v10025114mg
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
CICLE_v10025114mg
Proteasome [BR:
cic03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
CICLE_v10025114mg
Mitochondrial biogenesis [BR:
cic03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
CICLE_v10025114mg
Exosome [BR:
cic04147
]
Exosomal proteins
Proteins found in most exosomes
CICLE_v10025114mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Actin
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
18037511
NCBI-ProteinID:
XP_006427662
UniProt:
V4SJT5
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MAAKTEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPQNTVFDAKRLIGRRFSDPSVQSDMRHWPFKVVSGPGDKPMIVVTYKGEEKRFSP
EEISSMVLTKMKEIAEAYLGHAVKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEP
TAAAIAYGLDKKASRTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRLVNHFVAEFRRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGIDFY
ATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSLVHDIVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGDQKVQDLLLLDVTPLSLGIETAGGVMTTLI
PRNTTVPAKKEQVFSTYADNQTSVLIQVYEGERARTKDNNLLGTFELKGIPPAPRGVPQI
NVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEDIERMVQEAEKYKAEDEQVKK
KVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFED
KLKELEGLCNPIIAKMYQGDGGDVPMGGGYGSSGSGGSGAGAGPKIEEVD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaaactgaaggcaaggccatcggcatagaccttggaacgacttacagctgc
gttggagtatggcaaaacgatcgcgtagagatcatagccaatgatcaaggcaacagaacc
actccctcttatgttgcctttactgacacggaacgtctcatcggcgatgcggctaaaaac
caagtcgccatgaaccctcagaacactgttttcgacgccaaacgactcatcggcaggcga
ttctccgacccgtcggttcagagcgacatgaggcactggccgtttaaggttgtttcaggg
cctggcgacaagcctatgattgttgttacttacaaaggcgaagagaaacggttttcacct
gaagaaatctcttctatggtgttgactaagatgaaggagattgccgaggcttatcttggt
cacgctgtgaagaacgctgtggtcactgttcctgcttattttaatgactctcaaaggcag
gcaacgaaggatgctggtgctattgctgggttgaatgtcatgagaatcatcaacgagcct
accgctgctgctattgcttatggcttggacaagaaggcatcgaggactggtgaaaagaac
gtgctgatattcgatctcggtgggggcacttttgatgtttcgctgctgacgattgaggag
ggtatctttgaagtgaaggctactgctggtgatactcatcttggaggtgaggattttgat
aacaggcttgttaatcattttgttgccgagtttaggaggaagcataagaaagatattagt
ggcaacgctagagcattgaggcgtttgcggacagcatgtgagcgagctaagaggactttg
tcttccaccacgcagaccacaattgagattgattcgctctatgaaggtattgatttctat
gctactattaccagagccagatttgaagaattgaacatggatttgttcagaaaatgtatg
gaacctgtggagaaatgtctccgcgactcgaagattgataagagtctggttcatgatatt
gttctcgttggtggctcaacaagaattccgaaagttcaacagttgttgcaagatttcttc
aacggcaaggaactctgcaagagcataaaccctgatgaggctgttgcttatggagctgct
gttcaggctgctattttgagcggtgaaggtgaccagaaggttcaagatttgctcctcctt
gatgttacacctctcagccttggtattgagactgctggtggtgtgatgacgaccttgatt
ccaagaaacacgaccgttcccgccaagaaggagcaagtcttctcaacttatgctgataat
cagaccagtgtgctaattcaagtgtatgaaggcgaaagggctagaactaaggacaacaat
ctgcttggtacatttgagctgaagggcattcctccggcgccaagaggtgttcctcagatc
aatgtgtgctttgacattgatgctaatggtatattgcacgtgtccgcggaagataagact
gctggagtgaagaaccagattacaatcaccaatgataagggaagattgagcaaggaagat
atcgagaggatggtgcaagaggcagagaagtacaaggctgaagatgaacaagtgaagaag
aaggtggaggcgaagaacaagttagagaattacgcgtacagtatgaggaatacagtgaag
gatgacaaggttgcaggaaaattggccgcagcagacaagcaaaagattgagaaggcagtt
gatgagactgtcgagtggcttgacgggaatcaactggctgaagttgatgagttcgaggac
aagttgaaggagttggagggcttgtgcaatcccataatagcaaagatgtatcaaggtgac
ggtggggatgttccaatgggtggcggctatggctcctccgggtctggtggttctggtgcc
ggtgctgggcctaagattgaggaagttgattga
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