Citrus x clementina (clementine): CICLE_v10025131mg
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Entry
CICLE_v10025131mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CICLE_v10025131mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10025131mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CICLE_v10025131mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_THOC3
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EMC1_N
Beta-prop_ACSF4
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_1st
WDR55
WD40_WDHD1_1st
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Androglobin_V
KNTC1_N
Syd
PQQ_2
Motif
Other DBs
NCBI-GeneID:
18036636
NCBI-ProteinID:
XP_006427198
UniProt:
V4RZC8
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MAKRMLKSLITSFTSDGDFLAVLSPNGVVKIWSTNDGSLLAEWKQPDGEPVVSYSCLACS
FVGKKRRKERGTLLLALGTSNGDILAVDVLTGEMKWKSTGRHPGGLAGLAFAKKGRSLHV
VGTNGMASEMKSEMGEVIREFKASEKPISSSAFLCEEKIFALASSEVRILSLENGEEVLK
FSDDVGLLQYVSASDGAKTIITVGYGEKHLQVWRCDINSKTVNKGPALSMQHSPIAIDCK
NSPNGEDGTVILAVAESGVAYSWNLKTVSQGEKTNPTKITVKLKKADADQQNSVNVKKSR
TSIIAARLNDLEADGQVTAVIGYGSIDTPQFSFVDISNPGENMVISAGDTSETVQENGVP
AAKGLHDLESEAATASAQNEKRSKKRAASDPDLETTRDVVDGHIEDMDGVLLDDDQNEPT
MGEKLENLNLHDNNESKDQETPESSQTKPPSADSVNILLKQALHADDRALLLECLYNQDK
KVIANSISLLKPSDVLKLFHSLVSIIQSRGAVLACALPWLKSLLLQHASGIMSQESSLSA
LNTLYQLIESRVSTFQSAVQISSCLDFHFSGVVDEGVEENNDVIPLVYEDKDSSDEEGEE
ELEDAMETDQENEEENEDNIDNDIANGISDFEGIEAMSD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacggatgctgaagtctctcataacgtctttcacttctgacggtgacttcctc
gccgtcttgtccccaaacggcgtcgttaaaatatggagcacaaatgatggaagtctattg
gcagagtggaaacagcctgatggagaacctgtagttagttattcgtgtttggcatgcagt
tttgttgggaagaagcgtagaaaagaacgtggtactctcttgttagctcttggcaccagt
aatggggacatcttggcagttgatgttcttactggtgagatgaagtggaaatctaccggg
cgccatcctggtggacttgccggtcttgcttttgcaaagaaaggccgtagtttacatgtt
gttggaacaaatggaatggcttctgagatgaaatcggaaatgggagaagtaataagagag
ttcaaagcttcagaaaagcccatctcttcttcagcctttttatgcgaagagaaaattttt
gctttagccagtagtgaggtacggattctaagtttggagaatggggaagaggttctgaag
ttctcggatgatgtgggtctcctgcagtacgtatctgcatctgatggtgcaaagaccatt
attacagtgggttatggggagaaacatcttcaagtgtggaggtgtgatatcaattcaaaa
actgtgaataaaggacctgctctttcaatgcaacattctcctatagctattgactgcaag
aatagtcccaacggagaagatggtacagtcatattagcagttgcagaatctggagtagct
tattcgtggaacttgaagacagtttcacaaggcgaaaagacgaatccaacaaagatcact
gtaaaacttaaaaaagctgatgcagaccagcaaaatagtgtgaatgtgaaaaagagtcga
acttctatcattgctgccagattgaatgatttagaagctgacggacaggtgacagctgtt
attggttatggctcaatagatactccacagtttagttttgtggatattagtaacccaggg
gagaacatggtgatttctgctggagatacatctgaaactgttcaagaaaatggggttcct
gcagcaaaaggtctccatgatttggagtcggaagcagccactgcttcagcccaaaatgaa
aagagaagcaagaaacgagcagcatctgatcctgatcttgaaactacaagagatgttgta
gatggtcacattgaggacatggatggagttcttcttgatgatgatcagaatgagcctacc
atgggtgagaaacttgaaaatctgaatttacatgataataatgaatccaaggaccaggag
actccagaatcctctcagacaaagcctccaagtgcagactcagttaatattctgcttaag
caagcattgcatgctgatgatcgggcccttctcttagagtgcttatataaccaagacaaa
aaggtcattgcaaattcaatatctcttttaaaaccctctgatgttctcaagctttttcat
tctctagtatcgataatccagtcgaggggtgcagtgttggcatgtgctcttccatggcta
aagagtttgcttcttcaacatgctagtggaataatgtctcaggaatcttctttatccgcc
ctgaatactttgtaccagcttatagaatctagagtctcaactttccagtcggctgttcaa
atatcaagttgcttagacttccatttttcaggggttgtcgacgaaggagtagaagagaac
aatgacgtgattcctctggtatatgaggacaaagattccagtgacgaagagggtgaagag
gaattggaagacgccatggaaacagatcaagagaatgaagaagaaaacgaagacaatata
gataatgatattgccaatgggatcagcgacttcgaaggaatcgaggccatgagcgattga
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