Citrus x clementina (clementine): CICLE_v100253982m
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Entry
CICLE_v100253982m CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CICLE_v100253982m
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cic01009
]
CICLE_v100253982m
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v100253982m
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v100253982m
Protein phosphatases and associated proteins [BR:
cic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
CICLE_v100253982m
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
CICLE_v100253982m
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
CICLE_v100253982m
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
18037767
NCBI-ProteinID:
XP_006426480
UniProt:
V4SLJ1
LinkDB
All DBs
Position
Unknown
AA seq
267 aa
AA seq
DB search
VTSNETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVD
VKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDLRQSALCDSHAILFEEQEAPG
SRSFFTEIIASISDIKFAKDGRHILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDL
YENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCAPGSTEATTLEASKNPMRRQVQTPS
RPSRSLSSITRVVRRGGCFPCFLAFKF
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtaacgtccaacgagactagcctagtggctagatgtcgaagggtatatgctcatgcacac
gattatcatatcaattctatttctaacaatagtgacggtgaaacatttatatcggctgac
gatctgcgaattaatctttggaacttggaaattagcaatcaaagttttaacattgttgat
gtgaagcctgcaaacatggaggatctaactgaggtgataacttcggcagaatttcaccct
actcactgtaatatgttagcatatagcagctcaaagggctcaatacgccttattgacttg
aggcaatcagctttgtgtgattctcatgctatattgtttgaggaacaggaggcccctggt
tctagatcattcttcacagaaataattgcatctatttcagatattaagtttgcaaaggat
ggaagacatatacttagtcgtgattacatgactcttaagttgtgggatattaacatggat
tcaggccctgttgcaaccttccaggttcatgaatacttgagacctaagctgtgtgattta
tatgaaaatgattcaatctttgataaatttgagtgttgcttaagtggtgacggattgcgg
gtggctacaggttcttacagcaatctattccgtgtgttcggctgtgccccaggaagcact
gaggccacaactttggaagccagcaaaaacccaatgaggagacaagttcaaaccccttca
aggccttccagatcccttagcagcataacacgtgttgtcagacgaggtgggtgctttcct
tgctttcttgcttttaaattttga
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integrated database retrieval system
