Citrus x clementina (clementine): CICLE_v10026375mg
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Entry
CICLE_v10026375mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12897
transformer-2 protein
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10026375mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cic01009
]
CICLE_v10026375mg
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10026375mg
Protein phosphatases and associated proteins [BR:
cic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CICLE_v10026375mg
Spliceosome [BR:
cic03041
]
Common components
Common spliceosomal components
SR proteins
CICLE_v10026375mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RSRP
PRP38_assoc
Transformer
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
18035963
NCBI-ProteinID:
XP_006425346
UniProt:
V4SDE9
LinkDB
All DBs
Position
Unknown
AA seq
166 aa
AA seq
DB search
MADSPRKKDLRSPSPVRELSRSRSRSRSFSRSRSRSRSGSWSRPRQRSRSQSRGRSRSRS
RGRTETGNPGNTLYVTGLSTRVTERDLEKHFSKEGKVASCFLVVEPRTRISRGFAFVTMD
SVEDAERCIKYLNQSVLEGRYITVERNTLRQLCWQQSKMTSSSMST
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcctcgcaaaaaggatttgcggtccccttcccctgtgagggaactttca
aggtctagatctagatctaggtctttctctaggtcgaggtctcgatcaagatcaggatct
tggtctaggccaaggcagagatcccgttcccaaagtcgcggcagatcaaggtccagaagt
cgtggaaggaccgagactggaaatcctggaaataccctttatgtaactggcctatctaca
agagtcacagaaagggaccttgaaaaacatttctccaaggaggggaaggttgcttcatgt
tttcttgttgtggagccccgtacacgcatctctcgaggttttgcttttgttactatggat
agtgttgaggatgctgaacgctgcatcaagtatctcaaccagtcagttctggagggccga
tatattactgtggagaggaacaccttgcgtcagctatgttggcagcaatcaaagatgacc
agttcatccatgtcaacttaa
DBGET
integrated database retrieval system
