KEGG   Citrus x clementina (clementine): CICLE_v10027073mg
Entry
CICLE_v10027073mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K07887  Ras-related protein Rab-5A
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04144  Endocytosis
cic04145  Phagosome
cic04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CICLE_v10027073mg
   04145 Phagosome
    CICLE_v10027073mg
   04148 Efferocytosis
    CICLE_v10027073mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cic04131]
    CICLE_v10027073mg
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cic04147]
    CICLE_v10027073mg
   04031 GTP-binding proteins [BR:cic04031]
    CICLE_v10027073mg
Membrane trafficking [BR:cic04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    CICLE_v10027073mg
 Endosome - Lysosome transport
    CICLE_v10027073mg
Exosome [BR:cic04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CICLE_v10027073mg
  Exosomal proteins of other body fluids (saliva and urine)
   CICLE_v10027073mg
  Exosomal proteins of colorectal cancer cells
   CICLE_v10027073mg
  Exosomal proteins of bladder cancer cells
   CICLE_v10027073mg
GTP-binding proteins [BR:cic04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    CICLE_v10027073mg
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU ATPase RsgA_GTPase Gtr1_RagA AAA_24 TsaE MMR_HSR1 AAA_16 DUF6913 AAA_22 AAA_5
Other DBs
NCBI-GeneID: 18036574
NCBI-ProteinID: XP_006427011
UniProt: V4SSZ8
LinkDB
Position
Unknown
AA seq 198 aa
MARPGNKIIQAKLVLLGDMGTGKTSLALRFIKGQFYDQQEPTIGAAFFTQILSLSEATVK
FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISNMDTFNRANKLVQELQRQGNQIVVMAL
AANKSDLDSQREVPTEEGEQFSQENGMFYIETSAKTAQNINELFYEIAKRLARVSPPKRS
GINLNPETPERKGFCCLG
NT seq 597 nt   +upstreamnt  +downstreamnt
atggcaaggcctggaaacaagatcattcaagccaagctggtgcttctaggagatatggga
accggaaaaacaagtttggcattaagattcatcaaaggccaattttatgatcaacaggaa
ccaaccattggagcagcatttttcactcaaattttatccttatctgaagccactgtaaaa
tttgatatatgggacactgcaggacaagaaagataccatagcctggctcctatgtattat
cgcggtgcagcagccgctgtggttgtgtatgacatctcaaacatggatacgttcaataga
gccaataaattggttcaggaattgcaaaggcaaggaaatcaaattgtggtgatggcattg
gcagctaacaagtctgacttggattcgcaaagagaggtgccaacagaggaaggtgagcaa
ttttctcaagaaaacgggatgttttatattgaaacatcagcaaaaactgcacagaacatc
aatgagcttttctacgaaatagcgaagagactggcaagagttagccctccaaagcgttct
gggataaatctaaaccctgaaacaccagaaagaaaaggattttgttgcttaggctga

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