KEGG   Citrus x clementina (clementine): CICLE_v10027093mg
Entry
CICLE_v10027093mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K10664  E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cic04121]
    CICLE_v10027093mg
Enzymes [BR:cic01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     CICLE_v10027093mg
Ubiquitin system [BR:cic04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    CICLE_v10027093mg
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-ANAPC11 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_16 Rtf2 zf-Nse RINGv Prok-RING_4 Prok-RING_1 Rad50_zn_hook
Other DBs
NCBI-GeneID: 18037700
NCBI-ProteinID: XP_006426309
UniProt: V4UJM0
LinkDB
Position
Unknown
AA seq 548 aa
SSNRIQKPASSRNRFRHRVCMDDDIHPYPEPPTFSFVQEDSMYQSNDPPILDASSRIRSD
FHLILMIMRFENFNPSRWIIHVTWLLLLWPTLYDYASAQTVTQPPANPDGLYTTLDPSMA
IIILVLISTFFIVAMFSIYVRHCSDSRAQGGVLPSRALAGLSRNRGLDPSVIESFPIFVY
SAVKDLKIGKGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANL
TPESNKKVKLCDSNNESNQTHNNSASELSGEQSRAVIDINDEQSNSDAQVLEITNAASHV
TPMRNRPPRLGMPERFPRSHSTGHSLVLAGVSVERYTLRFPDEVRKKLMTRGKLKRTASF
NAALAMEGSSRKGGGGEGSSRGRNYVDRQIGRSDRWVFSMTPPFVSKMGFVKVGGEGMGL
GDGWNSNGRNLLTAVKSPLNCLNVKIGQGGESSSARPQFYRPFFFVMLAYLMICVVKSVK
EKKLSKTMRVVGDDSPILKPTFCAQLLKGERILREKDHIFAIILLLTFKHRRFDLYTSNL
KHEMEELS
NT seq 1647 nt   +upstreamnt  +downstreamnt
tcaagcaatcgaatccaaaagccagcttcgtccagaaatcgttttcgccatcgtgtgtgt
atggatgatgacattcatccatatcctgagccgccgacattctctttcgtgcaggaagat
tcaatgtatcaaagcaacgatccccctatcttagatgcatcttccagaattcggagcgat
tttcatctgatactaatgataatgaggttcgaaaacttcaatcccagccgttggatcatc
cacgtcacatggctgctgctcctctggccgacgttgtacgattacgccagcgcacagaca
gtcacgcaaccgccggcgaaccctgacggtctttacacaacccttgatccttcaatggca
atcatcatcttggttctcatatccaccttctttatcgtcgccatgttttccatctacgta
cgtcactgctctgattcacgcgcccaaggcggcgtcctcccttcacgcgccctcgccggg
ctctccagaaaccgcggcctcgatccttccgtcatcgagtctttccctatcttcgtctac
tctgcggtgaaggatctgaaaatcgggaagggtgctctggaatgtgccgtgtgtttaagc
gagtttgaggacgacgaaacgctgcgtttacttccaaaatgtgatcacgtgttccatcct
cattgcatcgatgtctggttagcctctcacgtgacgtgcccggtttgtagggccaacctt
actccagaatcaaacaaaaaggttaaattatgcgattcaaacaacgagtcgaatcagact
cacaacaactccgcttctgaactcagtggagagcaaagtcgcgctgtgatcgacatcaac
gacgagcaaagcaacagtgacgcgcaagtgcttgaaattactaacgcggcgagtcacgtg
acgccgatgaggaaccgaccgccgagattgggaatgccagagaggtttccgaggtcacat
tcgacaggacattcgcttgttctagctggagtaagcgttgagaggtacacactaagattt
ccagacgaggttaggaaaaagctaatgacgagaggtaaacttaagcgaacggcgagtttc
aatgccgctctggcaatggaaggcagttccagaaagggtggtggaggagaagggagtagt
agaggaagaaattatgtggaccggcaaattggccggtccgaccgctgggttttttcaatg
actccgccgtttgtttcgaagatggggttcgttaaagttggtggtgagggtatgggattg
ggcgatggttggaattcgaacggaaggaacctgttgacagcagttaaatcgccgttaaat
tgtcttaacgtgaagattgggcaaggtggcgaatcctcctcggcaaggccccagttttat
cgtccatttttctttgtgatgttggcttatctcatgatttgtgtggttaaaagtgtaaaa
gaaaagaaattgtcaaagactatgagggttgtcggcgatgactctccgatacttaagcca
acattttgtgctcaacttctaaagggagaaagaattttgagggagaaggaccacattttt
gcaattattttattacttactttcaaacataggaggtttgacctttatacaagcaacttg
aagcatgagatggaggagctatcatga

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