KEGG   Citrus x clementina (clementine): CICLE_v10027174mg
Entry
CICLE_v10027174mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K17302  coatomer subunit beta'
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cic04131]
    CICLE_v10027174mg
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cic04147]
    CICLE_v10027174mg
Membrane trafficking [BR:cic04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    CICLE_v10027174mg
Exosome [BR:cic04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   CICLE_v10027174mg
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT140_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_WDR19_1st PEP5_VPS11_N Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_Nup120_160 WD40_like Clathrin WD_LRWD1 Beta-prop_WDR75_2nd TPR_CcmH_CycH DCAF17 HEAT_GCN1
Other DBs
NCBI-GeneID: 18035884
NCBI-ProteinID: XP_006427053
UniProt: V4RZ12
LinkDB
Position
Unknown
AA seq 929 aa
MPLRLEIKRKLAQRSERVKSVDLHPSEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKSSRRIVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ
FIVEKRKNQESLLGKGKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVT
VKNLYWADSGDLVAIASDTSFYILKYNRDVVSAYLDSGKPVDEQGVEDAFELLHETNERV
RTGLWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMG
YTLLLSLIEYKTLVMRGDLERANEILPSIPKEHHNSVARFLESRGMIEEAIEVATDPDYR
FELAIQLGRLEVAQEIATEVQSESKWKQLGELAMSTGKLEMAEGCMKQAMDLSGLLLLYS
SLGDAEGISKLASLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPS
KVSEIVAIWRKDLQKVNPKAAESLADPEEYSNLFDDWQVALAVESKAAATRGVHPPAEDY
VNHADKSYMTLVEAFRHMQIEEEDTLENGDLDHEGSEQNGEENAEEQNGEEGSQEEPVVV
DADSTDGAVLVNGNEAEEQWVLTPRHQDS
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgcctctcagactcgaaatcaagagaaaacttgctcaaagatcagagagagtaaagtct
gtggatttgcatccatctgaaccatggattctagcaagtttgtattcaggaactgtgtgt
atctggaactaccagtcacagactatggctaagtcttttgaggtcactgagttaccagtt
agatcagctaaatttgtggcccgcaagcaatgggtagttgcaggagctgatgacatgttt
attcgtgtatacaattacaatacaatggacaaagttaaagtatttgaggctcatacggat
tacattagatgtgtggctgttcatcctacccttccgtatgtgctgtcatcatctgatgat
atgctcataaagctttgggattgggagaagggttggatgtgtactcagatatttgaggga
cattctcattatgttatgcaagtgacatttaatccaaaagacaccaatacctttgctagt
gcatcacttgatcgaaccattaagatttggaaccttggttctcctgacccaaatttcaca
cttgatgcccatcagaaaggagtaaactgtgttgattacttcactggtggtgataaacct
tatctgatcactggctcagatgatcacactgctaaggtatgggactatcagaccaaaagt
tgtgtccagacacttgaaggccatactcacaatgtgtctgcagtatgtttccaccctgag
cttcctattattatcacgggttctgaggatgggacagttcgtatttggcatgcaaccact
tacaggcttgagaacacattgaattatggtcttgaaagagtttgggctattgggtatatg
aaaagttcacgcaggattgtgatcggttatgatgagggaactatcatggtgaaaatcggt
cgtgaagaacctgttgctagtatggataatagtggaaagatcatatgggctaagcacaat
gagattcaaactgtgaacatcaagagtgtgggagcagattatgaggttactgacggagaa
agattgccattggctgttaaggagttgggaacctgtgatctttacccacaaagcttaaag
cacaatcccaatgggaggtttgttgtcgtctgtggagatggtgaatacattatatataca
gctttggcatggagaaataggtcctttggttctgcactggagtttgtttggtcatctgat
ggagaatatgctgttagagaaagttcatcaaagataaaaattttcagtaaaaattttcag
tttatagttgagaaaagaaaaaatcaagaaagtttgctggggaaggggaaaaggagtgtc
cgaccaaccttctccgccgagcgtatttatggaggaactttattggcaatgtgctcaaat
gattttatttgcttctatgattgggctgaatgcaggctaattaggcgaattgatgtcact
gtgaaaaatctttattgggctgacagtggtgatctagtggcaattgcaagtgatacatca
ttctacattctcaagtacaatcgcgatgtcgtttcagcttatttagatagtggaaagcca
gtggatgaacaaggtgttgaagatgcttttgagctccttcatgaaaccaatgagcgtgtc
aggactggtttatgggttggggattgtttcatttacaacaattcctcctggagacttaat
tactgtgttggcggtgaggtaaccacaatgtttcatttggaccggcctatgtacttgttg
gggtaccttgctagtcaaagccgtgtgtatctgattgacaaagagttcaatgttatggga
tacacattacttctcagcttgattgagtacaagactcttgtcatgcgtggagatttggag
agggccaatgaaatcttaccttcaattccaaaagagcatcacaatagtgtggctcgtttc
ctggagtcacgaggtatgatagaggaagctatagaagtggctactgaccccgattataga
ttcgaactagccatacagctgggcagattggaggttgcacaggaaatagctacagaagtg
cagagtgagtctaaatggaagcaattgggagaattagctatgtccactggaaagttggaa
atggctgagggatgcatgaaacaagcaatggatttgagtggtttgttgctgctctattct
tctttaggagacgccgaagggatatccaaacttgcttctctagctaaagagcaaggaaag
aacaatgttgcattcctttgtttatttatgttgggtaaattggaagactgcctccagctg
ttagtggaaagtaatcggatacctgaggctgctttgatggcaagatcataccttccaagc
aaggtttcagagattgttgctatttggagaaaagacctccaaaaggtgaacccaaaagct
gctgaatctctggctgatcctgaagagtattctaatctatttgatgattggcaagttgct
cttgctgttgagtccaaagctgctgctaccaggggtgtacatcctcctgcagaggactat
gtaaaccatgcagataaatcatacatgacgcttgtggaggctttcagacacatgcaaatt
gaagaagaggacactcttgaaaatggagatcttgatcatgagggttccgaacaaaatgga
gaagagaatgcagaggaacagaatggagaagaaggaagccaagaggagcctgtcgtagtg
gatgctgattcaacagacggtgcagtactcgttaacggtaacgaggctgaagaacagtgg
gtgcttacaccacgtcatcaggattcatga

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