Citrus x clementina (clementine): CICLE_v10027366mg
Help
Entry
CICLE_v10027366mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Module
cic_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10027366mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
CICLE_v10027366mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
18037627
NCBI-ProteinID:
XP_006427249
UniProt:
V4UM50
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MTWYSELAVFGNCQTGVDLVASICILILLSTLATHINVNADDQNTFNVLNYGAVGNGNSD
DSLAYAKAWNDACKANAQTPTMIIPKGKTFLVHPITFSGPCKSSNISIQLSGTIKAPDGP
SAWTSEIERWIVFGNITGLNINGRGHFDGNGQKWWDQSCKHHPGKAVSFIQCNNVHINEI
YVERSPQVHIVVDYSQDVHFKSLIIDSPETSPNTDGIHIARSHDVSVHTSIIAAGDDCIS
ISDQTSNISVTYVNCGPGHGISIGSLGKNGEEVKVENITVRHVNFCKTTNGARIKTWQAG
KGQVQHVEFSYMNFTEVQNPIIIDQYYCDQKDVCAKTSTGVHISDVRYLNATGTSATDVA
INLDCSNNVACTDIKLENIELQSATEGKGVLSSCKNAFGVAKGNCKPKSCLKSNS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgacttggtattctgagttggccgtatttggaaattgccaaactggcgtggatttagtt
gctagtatatgtattttgatcctgttatctacacttgcaactcacattaatgtgaatgcc
gatgatcagaatacatttaacgttctaaattatggagcagttggcaatggaaactcagat
gattccttagcatatgcaaaggcatggaatgatgcatgtaaggcgaatgcacaaacaccc
actatgattattccaaagggaaagacatttttggtgcatcccataacattttctggacct
tgcaagtcaagtaacatctccattcagctatcggggacaatcaaggcgcctgatggacca
agtgcatggacaagtgagatcgagcgatggatagtgtttgggaacataacaggactcaat
ataaatggccgtggccactttgatggaaacggacaaaaatggtgggatcaatcatgcaaa
caccatcctggaaaggcagtgagttttatacagtgcaataatgttcatataaacgagatt
tatgttgaacgaagtccccaagttcatattgttgtggattatagccaagacgtccacttc
aaatcgttgataatagattctcctgagacaagtcccaacactgatggaattcacattgca
cgttcccacgatgtttctgtgcacacctccattatagccgcaggcgatgattgcatctcg
atttctgatcagacttcaaatatttcagtcacttatgttaattgtggacctggtcatggt
ataagcatcggaagcttaggcaaaaatggagaagaagtgaaagtagaaaatatcactgtg
aggcacgttaatttctgtaagactaccaacggagcccgaatcaagacgtggcaagctggg
aaaggtcaagttcaacatgttgagttctcgtatatgaacttcacagaggtgcaaaatcca
ataatcatagaccaatattactgcgatcagaaggacgtctgtgcaaaaacgagtacagga
gttcatataagcgatgtgcgatatttgaatgcaactgggacatcagcaacagacgtggct
atcaatctcgactgcagcaacaatgttgcttgcaccgatatcaaattggagaatattgaa
ctgcaatcggctactgaaggaaaaggagtcctttctagctgcaaaaatgcctttggagtc
gctaaaggaaattgtaaaccaaaatcatgtctcaaaagcaattcttaa
DBGET
integrated database retrieval system