KEGG   Citrus x clementina (clementine): CICLE_v10027662mg
Entry
CICLE_v10027662mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03030  DNA replication
cic03410  Base excision repair
cic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CICLE_v10027662mg
   03410 Base excision repair
    CICLE_v10027662mg
   03420 Nucleotide excision repair
    CICLE_v10027662mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cic03032]
    CICLE_v10027662mg
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10027662mg
Enzymes [BR:cic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CICLE_v10027662mg
DNA replication proteins [BR:cic03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    CICLE_v10027662mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      CICLE_v10027662mg
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 18034019
NCBI-ProteinID: XP_006424295
UniProt: V4SFA7
LinkDB
Position
Unknown
AA seq 2206 aa
MDRRRWDRQDGRRTKKQKLIRSAEEELEAKLGYDLFSEGDKRLGWLLTFASSSLEDEDTR
KVYSCIDLYFVSQDGSTFKSKYKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEILEK
EDLDLKNHLSGLHKSYLKISFDTVQQLMDVKKDLLHVVERNQAKFDAAEAYESILTGKRE
QRPQDFLDCIVDLREYDVPYHIRFAIDNDVRCGQWYDVSISSTGPLLEKRVDLLQRAEVH
VCAFDIETTKLPLKFPDADYDIIMMISYMLDGQGYLIINRECVGEDIEDLEYTPKPEFEG
YFKVTNVNNEIELLRLWFAHMQEVKPGIYVTYNGDYFDWPFLETRAAHHGFKMSEELGFQ
CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAK
EKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQA
YKANVICPNKHQSDPEKFYRNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQL
LNNLDRDLQYAIKVEGKMDLESVSNYDEVKNAIMEKLLRLQEEPIREECPLIYHLDVAAM
YPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMGKRSDYYHLKKQI
ESEFVDGTNGHLSKSFLDLPKMEQQSRLKDRLKKYCQKAYKRVLDKPVTELREAGICMRE
NSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKC
ILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCVLPG
SFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLVDPVSKTYETHSECSIEF
EVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFD
KFLHGSTIEECYSAVAAVANRWLDLLDNQGKDIADSELIDYISESSTMSKSLADYGEQKS
CAVTTARRLSDFLGDTMVKDKGLRCQYIVACEPQGTPVSERAVPVAIFETDAEIMKFYLR
KWCKTSSDVGIRSIVDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLYKKVRE
KEDKFRQRKLVDIFSSLKKDDFLNKTCNAETNLMDENVEDLEDFPKKRRNSVNGPRPIVR
CFEVNNEQKTVKTTDQVDSLRQQLEPSEVSDQQPSSQNAIDTENIDRIVDYKGWLELKKR
KWKDNLDRRKKQKLGSLRASHQANGVSESLGDMINHKEAQRRTGVGSYFRRQEIAMTRCH
WQIIQLVPSSQSGVFLAWVVVEGIMVRIPITVPRLFYLSSKDPIVEKFPGRRVNKTLPHG
RRSFNLIEVMIDEDQFRKESKKLAALLADPEVEGIYETKVPPEFNAILQIGCVCKVDKST
KKRNTQDGWNLSELHMKTTAECPYLEQSVSFFYLYHSISDVRAIYIGYFPASRTVTVVVV
SPHQHRELSPSILEKQFREACRTLSTELPPGVRITFKVEYVGYVKDAEKILQRAISEYRH
EHYGPTVAVIECPNSHSLRLGLRVLNDFPCVSIPPNARDSKYQVLGWQQNAAKIGMQRCA
ASSQWFNERISLARYAHVPLGNFEPDWLMFTADVFFSRALRDQQQILWISDDGVPDLGGT
SEEDECFADEVHQPVLTYPGAYRKVSVELKIHHLSVNALLKSNQVNEMEGGGLFGFDQDM
NSGPYNNELCGFDETTSSAPAFRVVKQLIQRCLTDAVTSGNVFADAILQHLYRWLCSPHS
KLHDPVLHRILHKVMQKVFAMLLAEFRKLGATIIFANFSKVIIDTGKFDLSAAKAYCDSL
LKALQTRELFEWIELEPVHFWHSLLFMDQYNYGGIPARADESLDDDSQVDIVSSWNIAEY
LPKEIQDHFVLVVSEFMYIPWKHAQKLAASRASLQEGSSCTPSITVAAAENFESHIVQYV
KGEISSYFTGKLLSIVRDAIHHMKKMNNDQHNSPGVMQTAANIHKVDAPLEFIKHVCAAF
ALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCPSFILPNVICSYCNDCRDLDLCRD
MALLAQDWHCAMPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCNQVKAAHLAEQ
CACAGSFRCKEDASDFRSKMQIFLNIANRQGFQLLQECTSWILEVQ
NT seq 6621 nt   +upstreamnt  +downstreamnt
atggacaggcgaagatgggatcgtcaagacgggagacgcacgaagaagcagaagctaata
cgcagcgccgaagaggagctagaggcgaagcttggttatgatctattctccgaaggcgac
aaacgacttggctggcttctcactttcgcttcgtcttctttggaggatgaagacacccgc
aaagtgtatagttgcattgatctttattttgtttctcaggatggttcaactttcaagtca
aagtacaagttccgtccttatttttatgcagccacaaaggaaaaaatggaaatggatgtt
gaggcatatttgaggagacgatatgaaagccagattgctgatattgaaatcttggagaaa
gaggaccttgatctgaaaaatcatttatctggtttgcacaaatcctacctaaaaatatct
tttgatactgttcaacaattaatggatgtcaagaaagatctattgcacgttgttgaaaga
aaccaggcaaagtttgatgctgcagaagcatatgagtccattttgacaggaaaacgagaa
caaagacctcaagactttttagattgcattgttgatctccgggagtatgacgttccttac
catatccgctttgccattgacaatgatgtgcgctgtgggcaatggtatgatgttagtata
tctagtactggtcctctgcttgagaagagggttgatcttctgcaacgtgctgaagttcat
gtttgtgcttttgatattgagaccacaaagcttcctttgaaatttccggatgcagattat
gatataataatgatgatatcgtacatgcttgatggacaaggttacttgatcattaacaga
gagtgtgtgggggaggatatagaggatttagagtatactccgaaacctgaatttgaaggg
tatttcaaagtgacaaatgtgaacaatgagatagaacttcttagactgtggtttgcccac
atgcaagaggtgaagcccggtatttatgttacttataatggtgattactttgactggcca
ttcctggaaactagagcagcacatcatgggtttaaaatgagtgaagaactaggttttcaa
tgtgataaaaaccagggtgaatgtcgtgcaaaatttgcttgtcatctggactgttttgca
tgggtcaaacgtgatagttatcttcctcaggggagccaaggcctcaaggctgttacaaag
gcaaagttgggttatgatcccttggaggtgaatccggaggatatggttcgctttgcaaag
gaaaaacctcagatgatggcctcctattctgtttctgatgctgtagcaacttattacttg
tatatgacctatgttcatcccttcattttctctcttgcaactataattcccatgtctcca
gatgaggttttgcgcaaaggtagtgggaccctttgtgaaatgcttcttatggtccaggca
tacaaggcaaatgtcatctgccctaacaaacatcaatctgatccagagaagttctacagg
aatcaccttcttgaaagtgaaacatatataggtggtcatgtggaatgccttgaaagtggt
gtttttagatcagatcttccgactagctttaagcttgatccatctgcctatgagcaatta
ctcaacaaccttgatcgagatttgcaatatgctataaaagtagagggtaagatggacctg
gaatcagtctccaactacgatgaagtgaagaatgctatcatggaaaagcttctgaggttg
caagaagaacctatacgtgaagaatgccccctcatttatcatctggatgtggctgcaatg
tacccaaacattattttgacgaaccggctccagccaccatcaatagttacagatgaggtc
tgcactgcatgtgattttaaccgtccaggcaaaacttgtcttcgaaagcttgaatgggtt
tggcgcggagagatatttatgggaaaaagaagtgattattatcatctgaagaagcaaatt
gaatctgagtttgttgatggcaccaacggtcatttgtcaaaatccttccttgatctgcct
aagatggagcaacaatcaagacttaaagatcggctaaagaaatactgtcagaaggcatat
aagcgagtgcttgacaagccagtaactgaacttcgagaagcagggatctgcatgcgtgaa
aactcgttttatgtggacactgttcgcagcttccgcgatagaaggtatgaatacaaagga
ctaaataaggtttggaaggggaagttatcagaagcaaaggcaagcggaaattccattaag
atccaggaagcacaagatatggtagtgctatatgattccctacaacttgcccacaagtgt
atccttaattccttctatggatatgttatgcgcaagggtgctagatggtactctatggaa
atggctggtgtagttacatatactggcgcaaaaatcattcaaaatgctcgcttgctcatt
gaaaagattggaaaacctcttgaactagatacagatgggatctggtgcgtgctccctgga
tcctttcctgagaactttaccttcaaaacaaaagacttgaagaagaagctgactatttca
tatccatgtgtaatgcttaatgttgatgttgcaagaaacaacacaaatgatcaatatcag
acacttgtagatcctgtcagtaaaacttatgaaactcatagtgaatgctcaattgaattt
gaagtggatggaccgtacaaggcaatgatccttcctgcttctaaggaagagggaattttg
attaagaagcgatatgctgtttttaatgatgatggaacccttgctgaactaaaaggtttt
gaaattaagcgcagaggtgagctgaagctcattaaagttttccaggctgaacttttcgat
aagtttctccacgggtcaaccatagaggagtgctactcagctgttgctgctgtggcaaat
cgttggcttgatcttcttgacaatcagggaaaggatattgcagatagtgagttgattgat
tacatatcagagtcgagcacaatgagcaaatccttggcagactatggtgaacagaagtcg
tgtgcagtgacaactgcaagacgtctctctgattttcttggtgatacaatggttaaagat
aaaggactgcgttgtcaatatatagttgcatgcgaaccacagggaacacctgtgagtgag
cgtgctgttcctgttgcaatatttgaaactgatgctgagataatgaagttttatttacgt
aagtggtgcaagacttcatcagatgttggtatccgatccattgttgactggtcctattat
aaacaacgccttagctcagcaattcaaaaaattattactattcctgctgctatgcaaaag
gtttcaaatcctgttcctagggtagttcaccctgattggctgtataaaaaggttcgtgag
aaggaagacaaatttcgtcaaaggaaattagttgatatattcagttctttgaagaaggat
gattttttaaacaagacttgtaatgctgaaaccaatttgatggatgagaatgttgaagat
ttggaagactttccaaaaaagagaagaaattctgtaaatggacctaggccaattgttcgt
tgttttgaagtcaataatgagcaaaagacagtcaagacaacggatcaagtagattctttg
cgacaacaacttgaacctagtgaagtttcggatcagcaaccttcatcacaaaatgccatt
gatactgaaaatattgacagaattgtagattataaaggttggcttgagttaaagaaacga
aaatggaaagacaatcttgatagaaggaagaagcaaaagttgggcagtctgagggcttca
caccaagctaatggtgtttctgagtcgctgggtgacatgataaaccataaggaagctcag
agaagaactggtgtcggttcatattttagaagacaagaaatagccatgacccgctgccat
tggcagataatacagctagttccaagttcacagagtggtgtatttcttgcctgggtagtt
gttgaaggaatcatggttaggattcctataactgttccacgattgttttacctcagctct
aaagatcctatagtagaaaagtttcctggtaggcgtgtcaacaagacccttccccatgga
aggcgtagctttaacttaattgaggttatgattgatgaagatcagtttaggaaagaaagc
aagaaactcgctgctctcctcgcagaccctgaagtggaggggatatacgaaacgaaggtg
ccgccagagtttaacgctatacttcagattggttgcgtctgtaaagtggataaatcaact
aagaaacgaaatactcaggatggctggaacctgagtgagctgcatatgaagactacagca
gagtgtccttatctagagcaatcagtctctttcttttacctttatcatagcatttctgat
gtacgtgcaatatacattggatattttcctgcatcaagaacagtaactgttgtggtggtt
agtcctcatcagcatagggaattatcaccttctatccttgaaaaacaatttcgagaagct
tgtcggactttgtccactgaacttcctccaggcgtccgcattactttcaaggtggagtac
gtaggatatgtcaaggatgctgaaaagattctacaaagagctataagcgaatacagacat
gaacattatggacctacagttgctgttattgaatgcccaaactctcattcattgaggtta
ggtctacgtgttctcaatgattttccatgtgtaagcatccctcccaatgctcgtgacagt
aaatatcaggtacttgggtggcagcaaaatgctgcaaaaattggaatgcaacgttgtgct
gcatcatcacagtggttcaatgagagaatttccctagcgagatatgctcatgtaccattg
ggaaatttcgaacctgactggcttatgtttacagcagatgtgttcttttctagagcatta
cgcgatcagcaacagattctttggatatctgatgatggcgttccagatttaggaggcact
agtgaagaagatgaatgttttgctgacgaggtccatcaacctgttcttacatatcctgga
gcatatagaaaagtttctgtggagctgaagattcatcatctctctgtcaatgcacttctc
aaaagcaaccaagtgaatgaaatggaaggaggtggtttgtttggatttgaccaggatatg
aattctggaccttacaataacgaactttgtggctttgatgagactacctcatctgcacct
gcatttcgtgtcgtgaaacaactcatccagaggtgcctaacggatgcagttacttctgga
aacgtatttgctgatgccatactgcaacatctatatcgttggctttgcagcccccattca
aaacttcatgatccagtacttcaccgcatacttcacaaggtcatgcaaaaggtgtttgca
atgttgttggctgagtttcgcaaattaggtgccacaataatatttgcaaatttctcgaag
gtaattatagacacaggaaaattcgatctgtctgctgctaaagcttattgtgatagcttg
ctgaaagctctgcaaactagagaactgttcgagtggattgagcttgagccagtgcacttc
tggcattccttgctttttatggatcagtataactatggtggaatccctgctcgagctgac
gaaagtttagatgatgactcacaagtggatattgtttcaagttggaatattgctgaatac
ttgcccaaggaaattcaagatcattttgttttagttgtctctgagtttatgtatattcct
tggaagcatgcacaaaagctagcagcaagtagagcatctttgcaagagggcagctcatgc
actccttcaatcactgttgcagctgcagagaactttgagtcacacatagtgcaatatgtt
aaaggggagatcagctcttatttcactggaaaacttctaagtattgttcgtgatgctatt
catcatatgaagaaaatgaacaatgatcagcataactcacctggggttatgcaaactgct
gcaaacatccacaaagttgatgctccattggagttcattaagcatgtttgtgctgctttt
gctctcgaccaaaatgttcagcatgatgttctggtgatgagaaagaacctcttgaaatat
gttcgtgtaagggagtttgctccagaagctgagtttcgtgatccctgcccttcttttatc
ttaccgaacgtcatttgcagctactgcaatgactgtcgagacttggacttgtgccgtgac
atggctttactggctcaggattggcattgtgccatgccacagtgtggccagccttatgac
cgtgaggtgatggagaatgctcttcttcaaattgttcgtcagagagagcggctctaccat
ctacaggatctggtatgcattaggtgcaaccaggtgaaagctgctcatttagctgaacaa
tgtgcgtgtgctggttcatttaggtgcaaggaagacgcgtctgatttccgcagcaaaatg
cagattttcttaaacatagctaatcgacaggggtttcaactcctccaggaatgtacctca
tggattttagaagttcagtag

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