Citrus x clementina (clementine): CICLE_v10027687mg Help Entry CICLE_v10027687mg CDS       T02982                                  Name (RefSeq) hypothetical protein   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism cic  Citrus x clementina (clementine) Pathway cic03018   RNA degradation Brite KEGG Orthology (KO) [BR:cic00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CICLE_v10027687mg  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cic03019]     CICLE_v10027687mg Enzymes [BR:cic01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      CICLE_v10027687mg Messenger RNA biogenesis [BR:cic03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      CICLE_v10027687mg   mRNA degradation factors    3'-5' decay     Ski complex      CICLE_v10027687mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT MTR4_beta-barrel DEAD MTR4-like_stalk Helicase_C Ski2_N DEXQc_Suv3 ResIII Motif Other DBs NCBI-GeneID:  18035186 NCBI-ProteinID:  XP_006425004 UniProt:  V4UFZ3 LinkDB All DBs Position Unknown AA seq 1341 aa AA seqDB search MNRIQATNELAFRVGFSGHSGHLRVEPLYTVEDRTDPIKSLPDFILPPAFPRETAESIKE HIEDKYLSMGLDTNEFSPEKVGRQWDFDWFEMAKVPLEPSLAQSVVAPVWEVPFRRQTKQ GKWEPNSVQVDVSELMLGAQDSGPLPRVAGPAKDFVRGSINSRPFRPGGLEDSQSLERIL PDGASNGEWVQEILKGGPAQVVPPSFKQGLDLGELQAYPCLWNVYKDQDQNSLKSTSDEK LNELSVQFDDLFKKAWEEDVAEFEKDGPQLEPESIDSDAEGKTTVGFNSVKEADLSVLDE ILSVKSGGTTSILDDGGGQQQKEAWVVSGSTEAIADRFHELVPDLALDFPFELDNFQKEA IYYLENGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFSGKFD VGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEE VIIMLPRHINIVLLSATVPNTVEFADWIGRTKQKKIRVTGTTKRPVPLEHCLYYSGEFYK VCENEAFIPQGWKAAKDAYKRKNLSAASGATGSYAGASSPRDGARAQKREHPNRGKQNKH SGMQNSGNFSGSGWNQKNGGSQNNWGLRRSEVSIWLTLINKLSKKSLLPVVIFCFSKNHC DKLADGMSGIDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRVQSLLRRGIAIHHAGL LPIVKEVIEMLFCRGVVKVLFSTETFAMGVNAPARTVVFDNLRKFDGREFRQLLPGEYTQ MAGRAGRRGLDKIGTVVVLCRDEIPGESDLKHIIVGSATRLESQFRLTYIMILHLLRVEE LKVEDMLKRSFAEFHSQKKLPEQQQLLMRKLAQPPKTIECIKGEPAIEEYYDMYYEAEKY NNQITEAFMQSAHQFLMPGRVLFVKSQTGQDHLLGAVVKAPSANNKEYIVMLLKPDLPSA SETSLDKKSGDFSEGYFVIPKSKRGLEEEYCGSVSHRKGSGVINIKLPYHGAAAGVSYEV RGIDKKELLCICNCKIKIDQVGLLEDVSSAAFSKTVQQLLVLKSDEKKYPQALDPVKDLK LKDMNLVEAYYKWAGLLRKMAANKCHGCIKLEEHIKLAKENKRHKDEVNTLKFQMSDEAL QQMPDFQGRIDVLKEIGCIDADLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEA VAIMSAFVFQQRNTSEPSLTPKLSMAKERLYNTAIRLGELQAHFKVQIDPEEYARDNLKF GLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFRNAAAIMGNSALYKKME TASNAIKRDIVFAASLYITGV NT seq 4026 nt NT seq  +upstreamnt  +downstreamnt atgaacaggatccaagccacgaacgagctcgcttttcgggtcggattctccggccacagc ggccatctcagagtcgagccgctctacaccgtcgaagaccgcactgatcccataaaatct ctccccgattttatccttccacctgcgtttcctagggagacggctgaatcaataaaggag catatagaggataaatatctatcaatgggattggacaccaatgaattttcgccagaaaag gttggaaggcagtgggattttgattggtttgaaatggcaaaggttcccctagagccatcc ttggcgcagtctgttgtggctccagtgtgggaagtaccattcagacgacaaacaaaacaa gggaaatgggaacccaattcggtgcaggtggacgtatcagaactgatgctaggagctcaa gattcgggtcctctgccacgtgtggctggaccggcaaaagattttgtaagaggaagcatc aatagccgtccatttcgtcctggaggtttagaggattcccaatccttagagaggattctt cctgatggtgcttctaatggtgaatgggtgcaagaaattttgaaaggtggtcctgctcag gttgttcctccaagctttaagcaaggattagaccttggtgagctacaggcatatccttgt ttgtggaacgtctacaaagatcaggaccagaattctctcaaaagcacgtcagatgaaaag ttgaatgagttgtctgtacagtttgatgatttattcaagaaagcttgggaagaggatgtt gcagagtttgagaaagatggtcctcagttggaaccagagtctattgattcagatgctgaa ggaaaaacaactgttgggttcaacagtgtgaaagaggctgatctatctgtattagatgag atattatcagttaaatcaggaggaacaacatcaatattggatgatggtggtggacagcag cagaaggaggcatgggttgttagtggaagtactgaagcaattgcagatcgctttcatgaa cttgttcctgacttggcacttgattttccttttgagttagataacttccaaaaggaggct atctattatctggaaaatggggattctgtttttgttgctgctcatacttcagctgggaag actgttgttgcagaatatgcattcgctttggcaacaaaacactgtacaagggctgtatat actgctcccatcaaaaccatcagcaaccaaaagtatagggatttttctgggaaattcgat gttggcctcctcactggtgatgttagcttgaggccagaggcttcttgtctcatcatgacc accgaaatattaaggtcaatgctttaccgaggtgctgatattatacgtgatattgaatgg gtcatatttgatgaagtgcactatgtcaatgatattgaaagaggtgttgtttgggaagaa gttataattatgctcccaaggcatatcaatattgtcctcctttctgccacggtaccgaac acagttgaattcgctgattggattggtcgaacaaagcaaaagaaaattcgcgttactggc actacgaaaagacctgttcctctggagcactgcctatactactctggagagttctataaa gtatgtgaaaatgaagcttttatacctcaagggtggaaagctgctaaagatgcatacaaa agaaagaacttaagtgcagctagtggtgctaccggatcatatgctggagcttcatcacct cgtgatggggctcgggctcagaaacgtgaacatcctaatcgtggtaaacagaacaagcat tctggtatgcagaattcagggaatttctctggaagtggttggaatcaaaaaaatggtggt agccagaacaattgggggttacggagatcagaagtgtctatctggttgacattaataaac aagctctcaaagaaatcactattaccagtggttatattttgtttctcaaagaatcattgc gataaattagctgatggtatgtctggaattgatctcactagtagttctgagaaaagcgag atacgagttttttgtgacaaagcattttcacggttaaagggctctgatagaaatttacca cagattgtccgagtgcaaagccttcttcgtcggggaattgccatccatcatgcagggttg cttcccattgttaaagaagttattgaaatgcttttttgtcgaggtgtggttaaggttttg ttttcaacagagacatttgcaatgggggttaatgctccagctagaacggtcgtttttgat aatttaaggaagttcgatggcagggaatttaggcaattacttcctggggaatacactcaa atggcaggtcgtgctggtagaagaggacttgataaaattggtacagttgttgtactgtgc cgtgatgaaatcccgggagagagcgatttgaaacacattatagttggaagtgcaaccagg ctggagtctcagtttcgactgacatatattatgatccttcatcttcttcgtgttgaagaa ctgaaggtggaggacatgctgaaaagaagttttgctgaattccattctcagaaaaaactt ccagaacagcaacaacttttgatgcgaaaacttgctcagccaccaaaaaccattgaatgt attaagggtgaaccagcaatcgaggaatactatgacatgtactacgaagcagagaagtat aacaaccagataactgaggcgttcatgcagtctgcccaccaatttctaatgcctggaagg gtgttatttgtgaaatcccagacaggccaggatcacttgctgggagctgttgtgaaagca ccttctgctaataataaagagtacattgtaatgttgctgaaacctgatttaccatcagct tcagaaacttccttggataagaaaagtggggacttctcagaaggctattttgtgatacca aaatcaaaacgtggtcttgaggaagagtattgtggttctgtttctcaccgtaaaggctca ggtgttatcaacataaagttaccttaccatggtgctgctgctggagtgagttatgaggtc agaggaattgataaaaaagagctattatgcatatgcaattgcaagataaagattgatcaa gttgggcttctcgaagatgtcagcagtgctgctttttcaaagacagttcagcagcttttg gttttgaaatctgatgaaaaaaaatatcctcaagcccttgatccagtgaaagatttgaag ctgaaagacatgaatctagtggaagcatactacaaatgggctggcctattgcgaaagatg gcagcaaacaaatgtcatggttgtataaaattggaggagcacatcaagttagccaaagag aataagaggcacaaagatgaagttaatactctaaaatttcaaatgtctgatgaagcactt caacaaatgccagattttcagggccggatagatgttctgaaggaaattggttgtatagat gctgatcttgtagttcaaattaaaggccgcgttgcttgtgagatgaactcaggggaggag ttaatatgcaccgagtgtttatttgagaatcaactcgatgacctggaaccagaagaggca gttgctataatgtctgcatttgtgttccagcagaggaatacttccgaaccttctcttact cctaaactttctatggctaaagaaagattgtacaatacagctattagacttggagagctt caagcccatttcaaagtacagatagatcccgaggagtatgcccgtgacaatctcaagttt ggtcttgttgaagtggtttatgaatgggcaaagggcactccattcgcagatatctgtgag ctgactgatgtacctgaaggcctgatagtgcggaccattgtcagattggatgaaacatgc cgtgaatttagaaatgctgcggctattatgggtaactctgccctgtacaagaagatggaa actgcttccaatgcaataaagcgcgacattgtttttgcggccagcttgtacattactgga gtatag

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