Citrus x clementina (clementine): CICLE_v10027700mg
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Entry
CICLE_v10027700mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10027700mg
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cic00535
]
CICLE_v10027700mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
CICLE_v10027700mg
Meiosis-specific proteins
Cohesin complex and associated proteins
CICLE_v10027700mg
Proteoglycans [BR:
cic00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
CICLE_v10027700mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
ATG16
Motif
Other DBs
NCBI-GeneID:
18033843
NCBI-ProteinID:
XP_006424030
UniProt:
V4SEN3
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MHIKQVIIEGFKSYREQIATEPFSPQVNCVVGANGSGKTNFFHAIRFVLSDIFQNLRSED
RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
DTGNKRQQIIQVVKYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELHDARQKLL
EVDDTRTRFSDESAKMYNSLLDAQEKSKDSDKRFKDLMKEVQTLNKEKEAIEKRLTEAIK
NQTAFELDVKDIQERISGNSQARDDAKKQLRSLLEEIDDSSKELDKANTLYENKCIEEKK
ITKDIMEREKQLSILYQKQGRATQFSSKDARDKWLQKEIDDLERVHSSNLKQDQKLQEEI
QRLKGDLKERDEYIESRKREIAYLESSISQSREGFNNHKTQRDRMQDERKSLWVKESELC
AEIDKLKAEVEKAEKSLDHATPGDVRRGLNSIRRICREYKIDGVYGPIIELLDCDEKFFT
AVEVTAGNSLFHVVVDNDETSTKIIRHLNSLKGGRVTFIPLNRVKAPRVTYPKSNDVIPL
LDRLEFSPNFKPAFAQVFARTVICRDLDVCTRVARTDGLDCITLEGDQVSKKGGMTGGFY
DYRRSKLKFMNIIMRNTKTINAREEEVEKVRYKLQELDQKITEHVTEQQKTDAKRAHDKS
ELEQLKQDITNANKQKQIISKALENKEKSLADVRTQLDQLEASMAMKQAEMNTDLIDHLS
LDEKNLLSRLNPEITELKEKLITCRTDRIEYETRKAELETNLTTNLMRRKQELEALISSA
ENDVMLSEAESKKQELADAKSFVEDARQELKRVSDSIVQLTKELNKIKDEKAKLKTLEDN
YERKLQDDARELEQLLSRRNILLAKQEEYSKKIRELGPLSSDAFDTYKRKGVKELLKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQRRQAELDAGDEKIKELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDHGDDDDDDGPRESDVEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMIRRLADIANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVSKEDALDFIEHDQSH
NAE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgcacataaagcaggttataattgaaggttttaagagttatagggaacagattgctacg
gaaccttttagcccccaagttaattgcgttgttggtgccaatggatctgggaagacaaac
tttttccatgccattcgttttgttttgagtgacatctttcaaaacctgcgcagtgaagac
agacatgcgctactccatgaaggtgcagggcaccaagttttatctgcgtttgtggagatt
gtttttgataattctgataatcgcatcccggtggacaaggaagaggtgcgcttgcgtcga
acaattggtttgaaaaaagatgaatatttcttagatggaaagcacatcacgaaaacagaa
gttatgaacttattggaaagtgctggtttctctcgctctaatccatactatgtcgtgcag
caaggaaagatagcatctttgacattgatgaaagattcagagcgcctggatttgcttaag
gaaattggtggaactcgagtttatgaggagaggcgtcgtgaaagtttgaaaattatgcaa
gatacaggcaacaaaagacagcagataattcaagttgttaagtacttggatgagagactg
aaagaactggatgaagagaaagaggagctgagaaaataccagcaacttgacaagcagaga
aaatctctagagtacaccatttatgataaggaactacatgatgctaggcagaaattgttg
gaggttgatgacactagaaccagattttctgatgagtcagctaagatgtataacagtttg
ttggatgctcaggaaaagtccaaggattcagacaagaggttcaaagatctaatgaaagaa
gttcagactttaaacaaggagaaagaagctatagaaaagcgactaactgaagcaataaag
aatcagacagcatttgagcttgatgtgaaagacatacaagagaggatttctggaaattca
caagccagagacgatgcaaaaaagcagctccgttcgctattagaggaaatagatgactca
tccaaggagcttgacaaagctaatactttatatgagaacaaatgcatagaggagaagaag
ataacgaaagatatcatggaacgtgaaaagcagcttagcattctttatcagaaacaaggt
cgtgccacccaattttccagtaaagatgctcgtgataaatggcttcaaaaggaaattgat
gatctggaacgagttcattcttcaaacttgaagcaggaccaaaagcttcaagaagaaatt
cagcggctaaaaggtgacttaaaagagcgggatgagtacattgagagtcgcaaaagggaa
attgcatatcttgagtcttcaatctcccagtctcgtgaagggtttaataatcataagaca
cagagggacaggatgcaggacgaacggaagtccttgtgggtgaaagaaagtgaactttgt
gctgagattgataagcttaaagcagaagttgagaaggcagagaagagccttgatcatgca
actcctggggatgtgagaagagggctgaattctatccggcggatctgcagagaatataaa
attgatggagtgtatggtccaattattgagttgcttgattgtgacgaaaaattctttaca
gcagttgaggttaccgctggaaacagcttgtttcacgtggtggtggacaatgatgaaaca
tcaaccaagataattagacaccttaattcattaaaaggtggacgtgtgacttttatacca
ttaaatcgggtgaaggctcctcgcgtaacatatccaaagagcaatgatgtgatacctctt
ttagatagattggaattttctcccaatttcaaaccagcatttgcccaggtatttgcaaga
actgtgatttgtcgagatttggatgtgtgcacgagagttgctcgaactgatggtctggac
tgcattactttggaaggtgaccaagtaagcaagaaaggtggtatgacagggggattttat
gattacagacgttcaaaattgaagtttatgaatataattatgcggaacacaaaaactatc
aacgccagggaagaagaagtggagaaagttagatataagctccaagaactagaccaaaag
attacagaacatgttactgagcagcagaaaactgatgccaagcgagctcatgataaatca
gaactggaacagcttaagcaggatatcactaatgctaataagcagaagcaaattatttct
aaagctcttgaaaataaggaaaagtcacttgcagatgtgaggacacaacttgatcaactt
gaagctagtatggctatgaaacaggctgaaatgaacacagacctcattgatcacttatca
ctagatgaaaaaaatcttctatcgcgtttaaaccctgaaataactgagctcaaggagaag
cttatcacctgcaggacagatcgcattgagtatgaaaccagaaaagcggagcttgagact
aatctaacaactaaccttatgaggcgaaagcaagagttggaagctcttatatcttctgca
gagaatgatgtgatgctaagtgaagctgaatcaaagaagcaggaattggcagatgctaaa
tcatttgttgaagatgcaagacaagagcttaaaagggtttctgacagtatagttcaactt
acaaaggaactcaataagataaaggatgaaaaggccaagttgaagactttggaagacaac
tatgagaggaaactgcaggatgacgctagagaacttgaacaactattaagtagaagaaat
attcttcttgctaaacaggaggagtactcaaagaaaattagggaattgggtccattgtca
tcagatgcttttgacacatacaagcggaaaggtgtcaaagaactgcttaaaatgcttcac
aggtgcaatgagcaactgcagcagtttagccatgtaaataagaaagcacttgaccaatat
gtaaattttacagagcagcgagaagaacttcagagaaggcaagctgaactggatgcaggt
gatgagaaaattaaagaacttatatcagttttagatcagcggaaagatgaatcgatagaa
cgtactttcaaaggtgttgctcgtcattttcgagaagtattttctgagcttgttcaaggt
ggccatggccatctagttatgatgaagaaaaaggatggtgatcatggtgatgatgatgac
gatgacggacctcgtgaatctgatgtggaaggaagggttgagaaatatattggtgtgaaa
gtgaaggtttcctttactgggcaaggggagacacagtcaatgaagcagttatctggaggt
cagaaaactgtcgtggccctgacgcttatttttgcaatacagcgatgtgatcctgcacca
ttttatctgtttgatgaaattgatgcagcactggatcctcagtatcgaactgctgttgga
aatatgattcgtcgtttggcggacattgcaaatactcaatttataaccacaacatttcgt
ccagagcttgtgaaagttgctgacaaaatctatggggtgacacacaaaaacagagtgagc
cgtgttaatgttgtatccaaggaagatgctttagattttatcgagcatgatcagtcccac
aatgcggaataa
DBGET
integrated database retrieval system
