Citrus x clementina (clementine): CICLE_v10027701mg Help Entry CICLE_v10027701mg CDS       T02982                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism cic  Citrus x clementina (clementine) Pathway cic03020   RNA polymerase cic03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:cic00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CICLE_v10027701mg   09124 Replication and repair    03420 Nucleotide excision repair     CICLE_v10027701mg  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cic03021]     CICLE_v10027701mg    03400 DNA repair and recombination proteins [BR:cic03400]     CICLE_v10027701mg Enzymes [BR:cic01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CICLE_v10027701mg Transcription machinery [BR:cic03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      CICLE_v10027701mg DNA repair and recombination proteins [BR:cic03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       CICLE_v10027701mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 Motif Other DBs NCBI-GeneID:  18033722 NCBI-ProteinID:  XP_006423594 UniProt:  V4UC20 LinkDB All DBs Position Unknown AA seq 1195 aa AA seqDB search MMEDDYDYEEQHQQEEEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI VDESADIEIRPESQHNPGQQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR NLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQ DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGT GDFCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR DVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRV DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWH DLVAKGFIEYIDTEEEETTMISMTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASI IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG RPDRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYTRRDH SISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ PAEGRSRDGGLRFGEMERDCMIAHGASHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKN SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKEDTKQSKDHKKKGA NT seq 3588 nt NT seq  +upstreamnt  +downstreamnt atgatggaagacgattatgattacgaagaacaacatcaacaggaggaagaggatgaagag gaggagatcacgcaagaggatgcgtgggcggttatttctgcttatttcgaagaaaagggt ttggtgaggcagcagctcgactcttttgacgaatttatccagaacaccatgcaagaaatt gttgatgaatccgcggatatcgagattcggcccgaatcccaacataatcccggccaacaa tctgattttgccgagaccatctacaagatcagttttgggcagatatatctgagcaaacct atgatgacagaatcagatggagaaactgcgacattattcccaaaggctgcaagattgagg aacttaacctactcagctcctttatacgtggatgttacgaagagggttataaagaaaggc cacgatggtgaagaagtcaccgaaacccaagatttcactaaagttttcattggaaaggta cccataatgcttcggtcaagttactgcacactgtatcaaaactctgagaaggatttaacg gagcttggggagtgcccgtatgatcaaggtggatattttatcatcaatgggagtgaaaaa gttctgattgctcaggagaagatgagcaccaatcatgtctatgtcttcaagaagcggcaa cctaacaagtatgcctacgtggcagaagttcgttctatggcagagtcccagaacaggcca ccgagcacaatgtttgtacggatgctttctcggactagtgccaaagggggctcttcaggg cagtacattcgtgcaacccttccatacattcgtactgaaattcctatcatcattgttttt cgggctttagggtttgtggctgacaaagatatattagagcacatttgttatgacttccaa gacacgcaaatgatggaattgcttcggccttcccttgaggaagcgtttgtcattcaaaat caacaggtggcactcgactacattggaaaaagaggagcaactgttggtgtaactagggat aaaaggatcaaatatgccaaagagatccttcaaaaggaaatgcttcctcatgttggtaca ggagacttctgtgaaacaaagaaggcttactattttggatatatcattcatcggcttctt ctatgtgcacttggccggagggctgaagacgatagggatcattacggcaacaagaggctg gaccttgctggtcctttgcttggaggcttgtttaggatgctctttagaaagttgaccagg gatgtaagagcttacgtgcaaaagtgtgttgataatgggaaggatgtcaacttgcaattt gcaatcaaggcaaaaaccattaccagtggtctcaagtactcacttgctactggaaactgg ggtcaagcaaatgcagctggtacaagagctggagtttcacaggtgttaaatcgtctaact tacgcctctactttgtcgcatttgcgaagattaaattctcccataggccgtgaagggaaa ttggccaaacctaggcaattacataattcacagtggggaatgatgtgcccagctgaaaca cctgaagggcaagcttgtggtctggtaaagaatctggcattgatggtgtacataacagtt ggatcagcagcatatccgattttggaatttttagaagaatggggaacagagaattttgag gaaatttctccagcagttattcctcaagctacaaaaatttttgtcaatggttgttgggtt ggtattcaccgtgatcctgaaatgttggttaaaactttgagaagattgaggagacgggtt gatgtcaatactgaagttggggtggttagagatattcgtttgaaagaattacggatatat accgattacggtcgatgtagtcggccactgtttattgtagagaaacaaaggcttcttata aagaagagagacatcattgctctgcagcagagggaatcccctgaagatggtggttggcat gaccttgtggcgaagggatttatagaatatattgacactgaagaagaagagaccacaatg atttccatgacaattaatgatcttgtacaagcaaggcttcatccagaagaagcttatgct gacacttacacgcattgtgagatccatccatccttgattttaggtgtatgtgcttcaatt ataccgtttcctgaccataatcagtccccacgtaacacgtatcaatcagctatgggtaag caagccatggggatctatgtcaccaactaccaatttcgtatggatactttggcgtatgtt ctctattatcctcagaagccacttgttactacacgagcaatggaacacctccacttcagg cagcttccggctggcattaatgctattgtcgcaatcgcttgctattctggctacaaccaa gaagattctgttattatgaaccaatcgtcaattgaccgtgggttctttcgatctcttttc ttccgttcatatagagatgaggagaaaaagatggggacccttgttaaagaagattttgga cgtccagatagatctaatactatgggcatgcggcatggctcttatgataaattggatgat gatggtcttgcgcctcctggcacaagggtttctggtgaggatgtgatcattgggaagacc actcctatttctcaggatgaagctcaaggacaagcgtcacgctacaccagacgggatcat agcataagcttacgtcacagtgaaacagggatggtggatcaagttttactgacaaccaat gctgatggattgaggtttgtgaaagtgagagttagatctgtccgtataccccagattgga gacaagtttagtagtaggcatggtcagaagggaactgtgggcatgacttacactcaggaa gacatgccgtggacggtggaaggcatcacccctgatatcattgtgaatccacacgctatt ccatctcgcatgactataggtcagcttattgagtgcatcatggggaaggttgcagctcac atgggaaaggaaggtgatgctacaccttttactgatgtcacagtggataatatcagcaaa gctctacacaaatgtgggtatcaaatgcgtgggtttgagacgatgtacaatggtcacact ggcagacgactcactgctatgatattccttggccccacatattaccaaagactgaagcac atggttgatgataaaatccattctcgtggtaggggtcctgtacagattcttacaaggcag cctgctgagggacgatctcgggatggtggccttcgatttggagaaatggagagagattgt atgattgctcatggtgcttcccactttctcaaggagaggttgtttgatcagagtgatgca taccgtgttcacgtatgtgagcattgtgggttaatagctattgcaaatctgaagaagaat tcatttgaatgcagaggttgtaaaaacaaaactgatattgtacaggttcacatcccctat gcatgtaagttactgtttcaagagctaatggccatggccatagcaccaagaatgctcaca aaagaggacactaagcaatccaaagatcataagaagaaaggagcttag

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