KEGG   Citrus x clementina (clementine): CICLE_v10027712mg
Entry
CICLE_v10027712mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K12120  phytochrome A
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:cic00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    CICLE_v10027712mg
SSDB
Motif
Pfam: PHY PAS PAS_2 GAF HATPase_c PAS_4 PAS_9 HisKA
Other DBs
NCBI-GeneID: 18035337
NCBI-ProteinID: XP_006423945
UniProt: V4SEG2
LinkDB
Position
Unknown
AA seq 1117 aa
MSSSRPAQSSSNTGKSRHSARVIAQTTIDAKLHADFETSGTSFDYSNSVRVSSTAGGDQQ
PRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMVNHAVPSVGDH
PVLGIGSDIKTIFTAPSASALQKALGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLII
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMIQEVFELTGYDRVM
AYKFHEDDHGEVVSEITKSGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRARHVKV
LQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDEEEEGDNTLPQKRKR
LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQILEKNILRTQTLLCDML
MRDAPLGIVTQSPNIMDLVKCDGAALLYKNKIWRLGVTPNDFQLHDIVSWLSEYHMDSTG
LSADSLYDAGYPGALALGDVVCGMAAVRISPKDMIFWFRSQTASEVRWGGAKHEPDEKDD
GRKMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDVGTLDLDTKSIHSKL
CDLKIEGMKELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKIAELTGLSVDKAIGKH
FLTLVEDSSIDTVKRMLYLALQGQEEQNIQFEIKTHGSKINDDPITLIVNACASRDLHDN
VVGVCFVAQDITPQKTVMDKFTRIEGDYKAIVQNPNPLIPPIFGSDEFGWCCEWNPAMVK
LTGWKREEVIDKLLLAEVFGTNMACCRLKNQEAFVNLGIVLNKAMSGQDPEKVPFGFFAR
NGKYAECLLCVNKKLDREGAVTGVFCFLQLASHELQQALHVQRLSEQTALKRLKALAYTK
RQIRNPLSGIIFSRKMMEGTELGAEQKRLLHTSAQCQRQLHKILDDSDLDSIIDGYLDLE
MVEFTLNEVLVASISQVMMKSNAKGIRIVNETAEQIMSETLYGDSIRLQQVLADFLSISI
NFVPNGGQLMVSSSLTKDQLGRSVHLAYLELRITHAGGGIPEPLLDQMFGSEGDTSEEGI
SLLISRKLVKLMNGDVQYLREAGKSTFIVSVELAAAH
NT seq 3354 nt   +upstreamnt  +downstreamnt
atgtcttcgtcaagaccagcccaatcatccagcaatacagggaaatcaagacacagtgct
agagtcattgcccagactactatagatgcaaagcttcatgcagattttgagacttcgggt
acttccttcgactattcaaattcagtgcgagttagcagcacagctggtggagatcaacag
cctagatctgatagagtaaccaccgcttatcttcatcatatacagaaaggaaagctgatc
cagccatttggatgcttgctagccttagatgagaaaaccttcaaggtcattgcatacagt
gagaatgcacctgaattgttgacaatggttaatcatgcagtcccgagcgttggggatcat
ccagttcttggcattggaagtgacataaagaccatctttactgcccccagtgcctctgca
ttgcaaaaggcgctaggatttggggaagtatctcttttgaatcccattttggtccactgc
aaaacttctgggaagcccttttatgcaatcgtgcatcgtgtaacaggcagcttgatcatt
gacttcgaacctgtgaagccatatgaagtccccatgactgctgccggggctctacaatca
tacaagctcgcagccaaagcaataacccggttgcagtctttgcctagtgggagcatggag
aggctttgtgatactatgattcaggaggtgtttgaactcacaggttatgatagggtgatg
gcctataaatttcatgaggatgatcatggagaagtggtctctgagattacaaagtctggc
ctggaaccttatttaggtttgcattatccggccactgatattcctcaggctgcacgtttc
ctatttatgaagaataaagtccgtatgattgttgattgtcgtgcaagacatgtcaaagta
cttcaagatgagaaacttccctttgatctgaccttgtgtggttcaaccttaagggcccca
cacagttgccatttacagtatatggagaacatgaattccattgcttctctagtaatggca
gttgtagtgaatgacgaggaagaagagggtgacaatacactaccacagaagagaaagaga
ctttggggtttagtagtttgtcataatacaactccaaggtttgttccatttcctcttagg
tatgcatgtgagtttttggctcaagtatttgccatacatgttaataaggagttggaatta
gaatatcagatccttgagaagaacatattgcgtactcagacactcttatgcgatatgctt
atgagggatgcgcccttgggtattgtaacacagagcccaaatattatggatctcgttaaa
tgtgacggggctgctttattgtacaagaacaaaatatggagattgggagtgactccaaat
gacttccagctacatgatatagtgtcatggctttctgagtaccatatggattctacaggt
ttaagtgcggacagcttatatgatgcgggttacccgggggccctggctcttggtgatgta
gtttgcggaatggcagctgtgaggatttctcccaaggacatgattttctggttccgatcc
cagacagcttcagaggttcgatggggtggtgcaaagcatgaacctgatgagaaagatgac
ggtaggaagatgcatccaagatcatcattcaaggctttccttgaagttgtcaagacaaga
agcttaccttggaaggactatgaaatggatgcaatccattctttgcagcttatattgagg
aatgcattcaaggatgttggaactttggatttggatactaaatcaatccactcaaaactc
tgtgatctgaaaatagaaggaatgaaggaactggaagcggtgactagtgaaatggtccgc
ctcatcgaaacagctacagtaccaattttggctgttgatgtagatggtctggtcaatggg
tggaatacaaaaatcgctgagttaaccggcctttctgttgataaagcaattggaaagcat
ttcctcacactcgtggaagattcttcaattgataccgtcaaaaggatgttgtacttggca
ttgcaaggacaagaggagcagaatatccaatttgagatcaaaacacatggatctaagatt
aatgatgaccccataactttaattgtgaatgcctgtgcgagcagggaccttcatgataat
gttgttggagtatgttttgtggcccaagatatcactcctcagaagacagtcatggacaaa
ttcaccaggattgaaggtgattacaaagcgattgtacaaaacccaaacccattgatccct
cccatatttggttcagatgaatttgggtggtgctgtgagtggaatccggcaatggtaaag
ttgactgggtggaagcgagaggaagttatagacaaattacttttggcagaggttttcggg
accaacatggcatgctgtcgtctgaagaatcaagaggcttttgtaaatcttggcattgta
ctaaacaaagccatgagtggtcaggatcctgagaaggttccttttggtttctttgctcgt
aatgggaagtatgcggaatgcttgttatgtgtcaataagaaattggacagggagggagcc
gtcactggtgtgttctgtttcttgcagcttgccagtcatgagctgcaacaagcacttcat
gtccagcgattatcagagcaaactgcgctgaagagattgaaagctttagcttatactaaa
aggcagatccgaaatccactatctgggatcatattttctcggaaaatgatggaaggcact
gagctaggagcagaacagaaacggcttttgcataccagtgcacagtgccagcgtcagctt
cataagattcttgatgactcagatcttgatagtattattgatggctacttggatctagaa
atggttgagtttaccctgaatgaagtattggttgcctctatcagtcaagtgatgatgaag
agcaatgcaaagggcatccgaatagtcaatgaaacggctgaacagatcatgagtgaaacc
ttatatggagatagtattaggcttcaacaggtcttagctgatttcttgtcgatatcaatt
aatttcgtgccaaatggaggccagcttatggtttcatctagtttgaccaaagatcaattg
gggcggtctgttcatcttgcatatctggagctcaggataacacatgccggtggtgggata
cctgaaccgttgctggatcaaatgtttggaagtgagggagatacatctgaggaaggcatt
agcttgctaatcagccgaaaactggtaaaacttatgaacggagatgtacaatatctaagg
gaagcaggaaagtcgactttcatcgtatctgttgaacttgctgcagcccattag

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