Citrus x clementina (clementine): CICLE_v10027719mg
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Entry
CICLE_v10027719mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11293
protein HIRA/HIR1
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10027719mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CICLE_v10027719mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_ELP1_1st
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
18034972
NCBI-ProteinID:
XP_006424269
UniProt:
V4UDX9
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MIAEKPSWVRHEGMQIFSIDVQPGALRFATGGGDHKVRIWNMKSVGKNFENDESTQRLLA
TLRDHFGSVNCVRWAKHGRYIASGSDDQVILIHEKKPGSGTTEFGSGEPPDIENWKVAMT
LRGHTADVVDLNWSPDDSILASGSLDNTIHIWKHEHWYCTAVLRGHSSLVKGVAWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNSASSQEVKAAPVGWTNGTSKIGG
KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGT
VANFHFEVKELGHRLSDAELDELKRSRYGDVRGRQANLAETPAQLLLEAASAKETTTKKV
VSDVQAIQAPAKSSVNIGVTTKASEPQTDNGKKSGGVASDGLNKVSTSGRISSPVKQREY
RRPDGRKRIIPEAVGVPVQQEGVTGGAQSQLHDFPPVSSDHRKDNNGVVPADGVMREVSV
RGTVGRSSDVKERSGVTARATITESLVIEKVPASAAGDGNVGVEQSGNVKASGSVAATTT
TLSIRVFDKKEGEDNVPVCLEARPREHAVNDIVGMGSTCMMKETEIACTRGSQTLWSDRI
TGKVTVLAGNINFWAVGCEDGCLQVYTKCGRRAMPTMMMGSAATFIDCDESWKLLLVTRK
GSLHVWDLFNRKCLLHDSLGALITTDPNSASKGTIKVISAKLSKAGSPLVVLATRHAFLF
DMNLMCWLRVADDCFPASNFVSSWNFGSIQSGELATLQVDVRKYLARKPGWSRVTDDGVQ
TRAHLEAQLASSLALKSPNEYCQCLLSYIRFLAREADESRLREVCESFLGPPTGMAEAAS
SNAKNIAWEPCVLGMRKHKLLREDILPAMASNRKVQRLLNEFMDILSEYESTETILDQKD
PAPPAISAPPATDQMDTDPPASDKMDTDPPKTDQMDTGPLATDQMDVTALASDRIDSAPS
QTDQLDSAPSQTDQLDCAPSATDQMGSTTSAADHSNSASLETDQANSVSSDTDQVHMFQL
PSVTDQVNATPAVRDFGS
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgagaaacccagttgggttaggcatgagggaatgcagattttttccattgat
gtacagcctggtgccctcaggtttgcgactggtggaggtgaccacaaggttcgtatatgg
aacatgaaatctgttggcaagaactttgaaaatgatgaatcaacccagaggcttcttgca
acccttcgcgatcattttgggtcagttaactgtgttaggtgggctaagcacggtcggtat
attgcatcaggttctgatgatcaggttattttgattcatgagaaaaagcctggttcagga
acaacagagtttggtagtggagagcccccagatatagagaactggaaagttgcaatgact
ttaagaggacacactgccgatgtggtggatctcaattggtctccagatgactcgatattg
gctagtggaagtctggacaacacaatccacatctggaaacatgagcactggtattgtact
gctgttcttagaggccactctagcctggttaaaggagtcgcttgggatcccattggctct
ttcatagctagtcaatctgatgataagactgtcattatatggcgaacaagtgactggagt
cttgctcacagaacagatggccactgggcaaaatcacttggttctacattcttcaggcgg
cttggatggtctccctgtggccatttcataacaacaactcatggtttccagaagcctagg
cattctgcacctgttctagagagaggtgaatgggcggcaacatttgatttcttaggacac
aatgcccctattatagtggtgaagttcaatcattcaatgttcagaaggaattccgccagt
tcacaggaagtgaaagctgcccctgttggatggacaaatgggacttccaagattggaggg
aaagaatcgcagccgtataacgttattgcaattggaagtcaggatcgtactataactgta
tggacgactgctagtccccgtcctctttttgttgccaagcattttttcactcaaagtgtt
gtggatttatcctggagtcctgatggttattctctttttgcctgttccttagatgggaca
gtggctaatttccattttgaggtgaaagagcttggccataggctaagtgatgctgaactt
gatgagttaaagagaagtcgttatggtgatgtcagaggtcgacaggcaaatctagcagag
actccagctcagttattgcttgaagcagcatcggctaaggaaaccacaactaaaaaggtg
gtttctgatgttcaggcaattcaggcaccggcaaagtcttctgtcaatataggggtcaca
acaaaggcttctgagcctcaaactgacaatggaaagaagagtgggggtgttgccagtgat
ggattaaataaagtgtcgacttctggccggatttctagtcctgttaaacaaagagaatac
agaagacctgatggtagaaagaggattattccagaagcagtgggagtaccagttcagcag
gaaggtgttactggtggtgctcaatctcagttgcatgacttccctcctgtgtcatccgat
cacagaaaggataataatggggtagttcctgctgatggcgttatgagagaagtttctgtc
aggggaacagtgggcagaagctctgatgtaaaggagcgttctggagttactgccagggct
actattactgagagcctggttattgagaaggttccagcatctgcagctggggatggaaat
gtcggtgtagaacaatctgggaatgtgaaggcttctggctcagttgctgctactactaca
actctttctattagagtatttgataagaaagaaggggaagataatgttccagtttgcttg
gaagcccgtcctagagaacatgctgtaaatgacattgttggaatgggaagtacatgtatg
atgaaagaaacagaaattgcctgcacaagaggatctcaaactctttggtctgataggata
acagggaaagtcactgttttagctggcaatataaatttctgggctgttggctgtgaagat
ggatgcctacaagtttatacaaagtgcgggagacgagccatgccaaccatgatgatggga
tctgctgcaacatttattgactgtgatgagagttggaaattgttacttgtcacaaggaag
ggatcattacatgtatgggatctcttcaacaggaagtgtctgcttcatgactcattgggg
gctctgattactactgacccgaattcagcttctaaaggcacaatcaaagtcatatctgcc
aagctatcaaaagcaggttctcctcttgttgttctggctacacgtcatgcattccttttt
gacatgaatctcatgtgttggctgagggttgcggatgactgctttcctgcatcaaatttt
gttagctcctggaattttggttcgattcagagtggcgagctggctacgttgcaggtggat
gttaggaaatacttggcgagaaagccaggctggagcagggtaactgatgatggagtgcag
acacgtgctcatttggaagctcagttggcatcttcgttggctttgaaatctccaaatgaa
tattgccagtgcctcctttcctacattcgcttcttagcaagagaagcagacgagtctcgt
ttacgagaagtctgtgaaagttttcttggacctccaactgggatggctgaagccgcatcc
tcaaatgcaaagaacatagcttgggaaccctgtgtactcggaatgagaaagcacaaactt
ttaagagaggatattcttccagcaatggcatcaaataggaaagtccagcggttgctcaat
gagtttatggatatcttgtctgaatatgagagtactgaaactattttagaccaaaaagat
cctgcaccgcctgctatatcagctccaccagcaactgatcagatggacactgacccacca
gcatctgataagatggacacagacccaccaaaaactgatcagatggacactggtccacta
gcaactgatcaaatggatgttaccgcactagcgtctgatagaatagactctgccccatca
caaactgatcaactggactctgccccatcacaaactgatcaattggactgtgccccatcg
gcaactgatcaaatgggttccactacttctgctgcagatcacagcaattctgcctcctta
gaaacagatcaagcaaattctgtctcatcagatacggatcaagtacatatgtttcaatta
ccatcggtgacagatcaagttaatgcgaccccagctgtaagagattttggctcttga
DBGET
integrated database retrieval system