Citrus x clementina (clementine): CICLE_v10027762mg
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Entry
CICLE_v10027762mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03030
DNA replication
cic03410
Base excision repair
cic03420
Nucleotide excision repair
cic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CICLE_v10027762mg
03410 Base excision repair
CICLE_v10027762mg
03420 Nucleotide excision repair
CICLE_v10027762mg
03430 Mismatch repair
CICLE_v10027762mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cic03032
]
CICLE_v10027762mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10027762mg
DNA replication proteins [BR:
cic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CICLE_v10027762mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CICLE_v10027762mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_19
AAA_30
RCF1-5-like_lid
AAA_22
PTCB-BRCT
Rad17
BRCT_2
nSTAND3
RuvB_N
Gp44_lid
AAA_assoc_2
AAA_17
AAA_33
Sigma54_activ_2
AAA_5
NPHP3_N
TsaE
Zeta_toxin
RNA_helicase
RsgA_GTPase
AAA_14
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
18034088
NCBI-ProteinID:
XP_006424055
UniProt:
V4SEQ3
LinkDB
All DBs
Position
Unknown
AA seq
958 aa
AA seq
DB search
MPQDIRKWFLKPHSKDKDNATIPANTALSNLETTNSEPGCGGHESMGRRKTSKYFATDKQ
KPEDGGEKEELPAKRKAEKDDGKSVRSSPLKKFHKADDDDDDFVPPSVKKNSVGATPSKK
LKSGSGRAVAQKSVDIDDDEEEDVKKTESPLKSSGRGRGGRGASGAPAVGRGRGGGRGGF
MNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTESVP
KKTNYLLCDEDIGGAKSTKAKELGTPFLTEDGLFDMIRASKPMKALAQAESKKSVEKVAA
SLPKKSPQNIEAKSTSAPKAPSERMKTVASPAKRKGQNIQQSLLTWTEKYRPKTPNEIVG
NQQLVKQLHAWLAHWNEKFLDTGTKRNGKKQNDASAEKAALLSGSPGMGKTTAAKLVCQM
LGFQAIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALSANMDRSKHPKTVLIMDE
VDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCSDLRFRKPRKQEIAK
RLMQIANAEGLEVNEIALEELADRVNGDIRMAINQLQYMSLSMSVIKYDDIRQRLLSSAK
DEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSSAGRDEVKR
LSLIARAAESISDGDIFNVQIRRNQQWQLSQSSSLASCIIPAALMHGQRETLEQGERNFN
RFGGWLGKNSTMGKNLRLLEDLHFHHLASRKSKLGRDTLRLDYFSLLLKQLTEPLRVLPK
DAAVKKVVEFMNAYSISQEDFDSIVELSKFQGHANPLEGIPPAVKSALTRAYNAQSKSRM
VQAADLVPLPGMKKAPKKRIAAMLEPPDDGIGEENGDNLAENEEENSSDTEGPDATNGEK
LQSELQSLNSSGIEVQLELKGAGNSSAKRKPAGRGKGGSASAEKKSGRGSGTAAKRKR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagatattaggaagtggtttttgaaaccacatagcaaagacaaagacaatgct
acaattcctgcaaatactgcactgagcaatttggagacaacaaattctgagcccgggtgt
ggaggccatgaaagtatggggagaagaaaaacgagcaagtattttgctacagacaaacaa
aaaccagaagatggaggagagaaggaggaacttccggccaagaggaaagcagagaaagat
gatggcaaatcagttagatcctccccattgaaaaaatttcacaaagctgatgatgatgat
gacgactttgtgccacctagtgtgaagaagaattctgttggtgccactcccagtaagaaa
ttgaagtctggttcaggcagagcagttgcacagaaatctgtagatattgatgatgatgag
gaggaggatgttaaaaagacagaatctcctcttaagtccagtggaaggggtcgtggcggt
agaggagcatctggggcacctgctgttggaaggggcagaggtggtgggcggggtggattt
atgaattttggagaaaggaaagatcctccacacaaaggagaaaaggaagtccctgaaggt
gctcctgattgcttagctggtttaacttttgtaattagtggaacacttgacagtttggag
agagaagaagctgaagatttaattaaacgccatgggggtcgtgttactgaatctgtcccc
aagaaaacgaattatcttttatgtgatgaagacattgggggagccaaatcaactaaagcc
aaagagctgggcactcccttccttacagaggatggattgtttgacatgatccgtgcttca
aagcctatgaaggcacttgcacaagcagaatcaaagaaatctgttgagaaagttgcagca
tctttgcctaagaaaagtcctcaaaatatagaagcgaagagcacttcggctccaaaagca
cccagtgaaagaatgaaaacagttgcttctcctgccaaaaggaaagggcaaaatatccag
caatctttgcttacatggacagagaagtataggccaaaaactcccaatgagattgttggg
aatcagcaactggttaagcagcttcatgcatggttggcgcactggaatgagaagtttctt
gacactggaactaaacgaaatggaaagaaacaaaatgatgccagtgctgaaaaagctgcg
cttttaagtggatcacctggtatggggaaaactacagcagcaaagttggtttgtcagatg
ctgggtttccaggctattgaggtaaatgctagtgatagccgagggaaagctgatgccaag
atttccaaaggaattggtgggagcaatgcaaattccataaaggaacttgtcagcaatgag
gccctcagtgctaatatggatcgttcaaaacatccaaaaactgtcctgattatggatgag
gtagatgggatgtctgctggagatagaggtggaattgctgatctcattgccagcataaag
atttctaaaattcctattatctgtatctgtaatgaccgctatagtcagaaattgaagagt
cttgtgaactactgctcggatctcagattccggaaacctagaaaacaggagattgcaaaa
aggttaatgcaaattgcaaatgctgaaggtcttgaggttaatgagattgcattagaggag
cttgcagacagagtgaatggagatattcgcatggctataaaccagctgcagtatatgagt
ctctccatgtcagttatcaagtacgatgacataagacagcgccttctaagcagtgcaaag
gatgaagatatttcaccattcacagctgttgataagctttttggctttaatggtgggaag
ttgagaatggatgagcggattgatctaagcatgagtgatccggatcttgtcccgctactt
attcaggaaaattatattaattataggccaagttcagctggtagagatgaagtgaagcga
ttgagcttgattgcccgtgctgctgagtctatcagtgatggcgatatattcaatgtccag
atccgaaggaatcaacagtggcaactctctcaaagcagttcgcttgcatcttgtattatt
cctgctgcactgatgcatggacaaagggagacacttgagcagggggaaaggaattttaac
aggtttggtggatggctgggaaagaattcgacaatgggcaaaaatttgaggcttttagaa
gatctgcattttcatcatcttgcttctcgtaaatctaaattgggaagggatactcttcga
cttgattatttttctcttcttttaaaacaattaacagagccacttcgagtgctgcctaag
gatgcagctgttaagaaagttgttgagttcatgaatgcttactcaataagccaggaggac
tttgatagtattgtggaactgtcaaaatttcagggtcatgcaaatccattggaaggcatt
ccaccagctgtcaaatcagccctaacaagagcttataatgcacaaagcaaatcgcgaatg
gtacaagctgcagatttggttccacttcctggaatgaaaaaggctcctaagaagcggatt
gcggcaatgttagaaccacctgatgacggaattggagaagagaatggggacaatttggct
gagaatgaagaagaaaattcttcagatacagaggggccagatgccacgaatggtgagaag
ttgcagtcagaattgcaaagtctgaattcatcaggaattgaagtacaactggaattgaag
ggagcagggaattcaagtgccaagaggaagcctgcgggcagaggaaaaggtggttccgca
tctgctgagaagaaaagcggccgtggttctgggactgcagccaagcgaaagagatga
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