Citrus x clementina (clementine): CICLE_v10027795mg
Help
Entry
CICLE_v10027795mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CICLE_v10027795mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10027795mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
CICLE_v10027795mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
AAA_16
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
18034979
NCBI-ProteinID:
XP_006423382
UniProt:
V4S865
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MSSDVESYSSTTPSTSVKHDMKVKTDTFDYSDPFSIKDLLDDLSSGKYGSVTKEIKELID
RKVQIFGPLLSQNPSLSSMFVDAEKLSGQALKSANRQAHHSVIDLEEDCVAVGVPSKSPA
VVVLSDDEDEGDKRPSYPFQEVRLMQPPVGPFLTEIQVRGNVDNMVRIEEQVRLAGETVV
EKDKGVYVGVEGDDDNQKKAEDDGLGDIWQEMSMAMEISKDVAEDNSSAEHMGEDADDCD
HSFVLKDDLGYVCRICGVIDRGIETIIDVQFNKVKRSNRTYLSDFRSAKDRESIDVGVKL
SEYELMVTEIAAHPRHTKVMKPHQVEGFNFLRRNLVTDNPGGCILAHAPGSGKTFMIISF
IQSFLAKYPQARPLVVLPKGILATWKKEFQRWQVEDIPLLDFYTVKADGRAQQLEVLKKW
VEEKSILFLGYKQFSAIICDTETSKISATCQEILLKQPSILILDEGHTPRNENTDVLQSL
AKVQTPRKVVLSGTLYQNHVKEVFNILKLVCPKFLKMDTSRSVVKRIMSRVQISGLKKQI
KTNAQDTFYELVEHSLQSDEDFQRKVTVIKDLREMTSGVLHYYKGDFLDELPGLVDFTVV
LNLSSRQKSETQKLKKWSRKMKIAAAGSATYLHPKLATYLHPKMNSLSEKSAPTDDKMDE
LLERLDIKDGVKAKFFLNMLNLCEASGERLLVFSQYLLPLKFVERLAAKMKGWTLGREIF
VISGESNADEREWAMDQFNNSPHSKVFLGSIKACGEGISLVGASRIIILDVPFNPSVTRQ
AIGRAFRPGQTKKVYAYRLVAAESPEEEDHATCLKKELISRMWFEWNEYCGYKNFQVETV
DVNDCGDLFLESQLLKEDVRVLYRR
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgatgtggaaagctacagcagtacaactccctccacaagtgtgaaacatgat
atgaaagtgaagacagatacttttgattattccgatccattttccatcaaggatttgctg
gacgacttgagctctggtaaatatggaagcgtgaccaaagaaataaaggaacttattgat
cggaaggtccagatatttggtccacttctctcgcagaatccttcactgtcgagtatgttt
gtggatgctgaaaagctgagtggacaagctttgaaatcagcaaatcgacaagcgcaccat
tccgtcattgatttggaggaagattgtgtggctgttggtgttccatcaaaatcaccagct
gtcgtggttctttcagatgatgaagatgaaggggacaagaggccttcttatccttttcaa
gaggtccgcttgatgcagccacctgttggaccatttttaacagaaatacaggttcgaggc
aatgtggacaatatggtacgaatagaagaacaggtaagattggctggtgaaactgtggtt
gagaaggataaaggtgtctatgttggtgtggaaggagatgatgacaaccaaaaaaaggct
gaagacgacggtcttggtgatatttggcaagagatgtcaatggcaatggaaatttccaag
gatgtggctgaagataattcatctgctgagcacatgggagaagatgcggatgactgtgat
cattcatttgtcttgaaggatgatcttggttatgtctgtcgcatctgtggagttatagat
agaggaattgagaccataattgatgtccaattcaataaggtgaaaaggagcaatagaact
tacctatctgattttcggagtgctaaagatagagaatcaattgatgttggagttaagctg
tctgagtatgagttgatggtgactgagattgctgctcatccaaggcatacgaaggtcatg
aaacctcatcaggtggaaggctttaactttcttcgtagaaatttggtgacagataatcct
ggtggctgcatattagcccatgctcctggatctggaaagacatttatgataatcagtttc
attcaaagtttcttagccaaatatccacaggctagaccactggttgtgcttcctaaagga
atcttggctacatggaagaaggagtttcaaagatggcaagtggaagatattcctctatta
gatttttacactgtaaaagctgatggtcgggctcagcaattggaggtgctgaaaaagtgg
gttgaggaaaagagtatacttttcttggggtacaaacagttctccgctattatttgtgac
actgaaaccagcaagatttcagccacctgtcaagagatactgctgaagcagccttcaatc
ctgattttggatgaagggcatactccaaggaacgagaatactgatgtgctgcagtccctt
gcgaaagtacagacacctcgaaaggttgtactttcaggaacgctctatcaaaatcatgtc
aaagaggtgttcaatattttaaagcttgtttgtcctaaatttctgaaaatggacacatcc
cggtctgttgttaagcgaataatgagtagagtgcaaatatctgggttgaagaagcagata
aagacaaatgcgcaggacactttttacgaattagttgagcactctctacaaagtgacgag
gattttcaaaggaaagtgacagtcataaaagatctgcgggagatgactagtggtgtcctc
cattattataaaggagatttcttggatgagcttcctggacttgtagatttcacagtagtg
ctgaatctcagttccagacaaaagagtgaaacccagaagttaaagaagtggtctaggaag
atgaagattgctgcagctggaagtgctacttatctacatccgaaattggctacttatctg
catccgaaaatgaattccctctctgagaaaagtgccccaacagatgataagatggatgag
ctgttggaaagactggatataaaagatggagtgaaggctaaattctttctgaatatgttg
aacttatgtgaggcttctggtgaaaggttactagttttcagtcagtacctcctgccctta
aaatttgtggagagactagcagcgaagatgaagggctggactcttgggcgggaaatattt
gtcatctctggggaatcgaatgctgacgaacgggagtgggcgatggatcagtttaataac
tctcctcactccaaagttttccttggatcaatcaaggcatgtggagagggaatttctctg
gttggggcatcccgcatcattattctggatgttccctttaatccatcagtgacccgccaa
gcaatcggcagggctttccggccaggccaaacaaagaaagtttatgcatatagattggtt
gctgctgagtctcctgaggaggaagatcatgccacttgcttgaagaaggaactgatctca
aggatgtggtttgaatggaatgagtattgtggttataaaaattttcaagtggagactgtt
gatgtgaatgattgtggtgatctctttttggaaagtcagctcttaaaggaagatgtacga
gttttgtacagaaggtag
DBGET
integrated database retrieval system
