Citrus x clementina (clementine): CICLE_v10027804mg
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Entry
CICLE_v10027804mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CICLE_v10027804mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10027804mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10027804mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CICLE_v10027804mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CICLE_v10027804mg
PBAF complex
CICLE_v10027804mg
GBAF(ncBAF) complex
CICLE_v10027804mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
Myb_DNA-binding
SWIRM
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
18035386
NCBI-ProteinID:
XP_006423245
UniProt:
V4SCB4
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MEIRNWIMKKFHSNPITQIELKDLSELEVGSLDARQEVMEFLDYWGLINFHPFPHVESSV
ANSDGDRMTDADSDAAAKKGSLLEKLYRFEEIKAGPPVAPMPSITFPAVPSGLFPESAIA
EELAKLEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMSSSDFILMV
PGEAAGVSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDMFL
DCDDDVDGNLKETTDDAPTNGDTSASKDVAEASESKTGAVEGQTQTSPMETSKPEDASEL
KICEDTSKPKDESDVKVDEQMLKSEDTSEGKVGQETGENIALKALREAFEAVGYVPTHET
PQSFAEVGNPVMALAAFLALLGGPDLTTASARSSLKSISGNSPAMQLAAKHCFILEDPPG
DKKEVARSESIVAEMADRDIQKDETLEDINVKECNSASVLDERDLSNDHGDKKIEDSVPE
EKRHAASLNEKPSEKLNGATGPANQDTPEKDEPGDLNELSNPKSPKDNQPSIVEESNDLP
SKVLQSSQKESGEGSSGEPAPPVDVEKDNSLLSDSLPSGKNEPDQPFISNSVAEPSPPSK
LTKDVDMVSDPQPSENNEPEKQITSSTEKPSESTEAPKDVEMVSASLPSEINEPQWTDSI
TGTETARVEDQNRDGQDEKHDSKETKNDQYIDKLKHAAVTALSAAAVKAKLLACQEEDQI
RQLATSLIEKQLQKLEAKLAFFNEMDNVTMRVREQLERSRQRLYQERALIIQARLGPSRV
MQPSVPANRNPMTFANSVARPPMSMTSPRPPISRPMVPQSSTPSNPFGSTTTAGSSIRPS
SQDNLSSVGMK
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggagatacgcaattggattatgaagaaatttcattcaaatccaatcactcagatcgaa
ttgaaagatttgtcagaacttgaagttggatccttggatgctaggcaggaggtgatggag
ttcttggactattggggtttgattaatttccatccattcccacatgtagaatccagtgtg
gcaaattctgatggtgacaggatgaccgatgctgatagtgatgcagcagcaaaaaagggt
tccttgcttgaaaaattgtatcgctttgaagaaattaaagcaggtcctcctgttgctcca
atgcctagcataacatttcctgctgtgccatctgggttgtttccagagtctgcaattgct
gaagagttggcgaaattagagggaccagctgttgagtaccattgcaattcttgctcggct
gattgctctcgcaaacgctaccattgtcaaaagcaggctgattttgatttatgtaccgat
tgcttcaataatggaaagtttggctctgacatgtcatcgtcggatttcattctcatggta
ccaggtgaagcagctggtgtaagtggtggaaagtggacagatcaggagacccttctcctc
cttgaagcattggaactttataaagaaaactggaatgagattgctgagcatgttgccact
aaaaccaaagcccaatgtatattgcattttgttcaaatgccaattgaggatatgtttctt
gattgtgatgatgatgtagatggcaatttgaaagaaactacagatgatgctccaacaaat
ggtgatacttctgcatctaaagatgttgctgaagcatcagagagtaagactggtgctgtt
gagggtcagacccagacttctccaatggaaacttcaaaaccagaagatgctagtgaattg
aaaatatgtgaagacacttcaaagcctaaagatgaaagtgacgttaaagttgatgagcaa
atgttaaaatcagaagataccagtgaggggaaggttggtcaggagactggtgaaaacatt
gcattgaaggctcttagggaagcatttgaagctgttggttatgttccaacacacgaaacc
ccacaatcctttgctgaagttggaaaccctgtaatggcattggcagcattcttggcacta
ttggggggacctgatttgactactgcttcagctcgtagttctttgaaatctatatctggc
aattctcctgcaatgcagctggctgcgaagcactgcttcattttggaagatccacctggt
gataagaaggaagtggctcgttctgagagtattgttgctgaaatggctgatcgagatatt
caaaaagatgaaaccctggaagacataaacgtcaaggagtgtaactctgcctcagtgttg
gatgaaagagatttgtcaaatgatcatggagacaagaaaattgaagattctgttccagaa
gaaaagagacacgcagcttccttgaatgaaaaaccctcagagaaattaaatggtgctaca
ggaccagcgaaccaagatactcctgagaaagatgaacctggtgatttgaatgaactaagc
aatccaaaatctccaaaggacaatcaaccaagtattgtggaggaatcaaatgatttacca
tccaaggttctgcaaagttctcagaaggagtcaggagaggggagttcaggagagcctgcc
ccacctgtagatgtagaaaaggataatagtctgttgtctgattctcttccttcaggaaag
aatgagcctgatcagccatttatatcaaattcagttgcagagccatctccaccttccaaa
ttaactaaggatgtggatatggtttctgatcctcaaccctcagagaataatgaacctgag
aaacaaattacgagttccacagaaaagccctccgaatccacggaggcacccaaggatgta
gaaatggtgtctgcttcactgccctcagaaataaatgaacctcaatggacagactcgata
actggaactgaaacagctagagttgaggatcaaaatagagatggccaagatgagaagcat
gactctaaagagacgaaaaatgaccaatacattgataaattgaagcatgcagcagttaca
gcactttccgcagcagcagtgaaggcaaaacttcttgcttgccaggaagaggatcaaatc
cgacaacttgctacatcactgattgagaagcagttgcaaaagttggaagccaagctagct
ttcttcaatgagatggataatgtgactatgagggtaagagagcaattggagaggtcaaga
cagaggctgtaccaggaacgagcacttataattcaagctcgacttggcccctccagagtt
atgcaaccatcagtgcctgccaatagaaatccaatgacctttgctaactcagttgcaaga
cctcctatgagcatgacctccccaaggccaccaatttcaagaccaatggtgcctcaatcg
tctaccccatccaacccatttggatccacaacaacggcgggaagttcaattcggccttcc
agccaggacaacctttcttcagttgggatgaagtaa
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