Citrus x clementina (clementine): CICLE_v10027840mg
Help
Entry
CICLE_v10027840mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CICLE_v10027840mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10027840mg
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10027840mg
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10027840mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cic04147
]
CICLE_v10027840mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CICLE_v10027840mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CICLE_v10027840mg
Membrane trafficking [BR:
cic04131
]
SNARE
SNARE associated proteins
Others
CICLE_v10027840mg
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CICLE_v10027840mg
Exosome [BR:
cic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CICLE_v10027840mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
CDC48_2
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_17
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
AAA_7
AAA_24
NB-ARC
TsaE
Vps4_C
DUF815
AAA_lid_PRS2_C
Zeta_toxin
Sigma54_activat
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
18034598
NCBI-ProteinID:
XP_006424506
UniProt:
V4SL33
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MSHPAESSDANSGKKDYSTAILERKKSPNRLVVDEAINDDNSVVGLHPDTMDKLQIFRGD
TILIKGKKRKDTICIALADDTCEQPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAFLRPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPIKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPISKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRRDN
PEAMDEDAAEDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGIGSEFRFA
EAGTGATTGADPFSTSAGGADDDDLYS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacccagctgaatcgtccgacgcgaattccgggaagaaggactactccacggcg
attctggagaggaaaaaatcgccgaatcggctggtcgttgacgaggcgatcaacgatgac
aactctgtcgtcggcttgcaccctgacaccatggacaagctccagattttccgcggcgac
accattctcatcaaaggaaagaaaaggaaggacactatctgcattgctcttgctgatgac
acatgtgagcagccaaagataaggatgaacaaggttgttcggtcgaatcttagggttcga
cttggtgatgttgtatctgtgcaccagtgcccagatgtgaagtatggaaagcgtgttcac
attctgccaattgatgataccatcgaaggtgttaccggaaatctgtttgatgcattcttg
agaccttatttcacggaagcttatcgccctgtgaggaaaggagatttattccttgttaga
ggaggaatgagaagcgtagagttcaaggttatcgagactgatccaggggagtattgtgta
gttgctccagacacagaaattttctgtgagggggaacctataaagagggaggatgaggat
aggttggatgaagttggttatgatgatgttggtggagtcaggaaacagatggctcagatt
cgtgagctagtggagctgcctctgaggcatcctcaactctttaaatcaattggtgttaaa
ccacccaaaggaatcttactttatggtcccccaggttctggaaagacattgatagccaga
gctgtggctaatgaaactggtgcgttcttcttttgtatcaatgggccagagatcatgtcc
aaattggctggagagagtgaaagcaatctcaggaaagcctttgaagaagcagagaagaat
gctccatcaatcatctttattgatgaaattgattcaattgcccccaagcgtgagaagaca
catggtgaggttgaacgaagaattgtttcacagcttttaactcttatggatggtctgaaa
tcccgtgcccatgtcattgttattggagctactaacagaccgaatagtattgaccctgct
ttgagaaggtttggtagatttgatagggagatagatattggcgttccagatgaagttggg
cggcttgaagttctccgcatccataccaagaacatgaagctgtctgatgatgttgattta
gaaaggattgcaaaagatacacatggttatgttggtgctgaccttgctgctctttgtacc
gaagctgcactgcaatgcatcagggagaagatggatgtgattgacttggaagatgaaacc
atcgatgctgagattcttaattccatggctgtttcaaatgagcacttccaaactgcactt
gggacaagcaacccctctgctctgcgtgaaactgttgtggaagttcccaatgtcagctgg
gaggacattggaggccttgagaatgttaagcgggagcttcaagagactgttcaatatcca
gtggagcatccagagaagtttgagaaatttggcatgtcaccttcgaaaggcgtccttttc
tatggtccccctggatgtgggaaaactttactggccaaggcaattgcaaatgaatgccag
gcaaacttcatcagtgtcaaaggccctgagctgctcacaatgtggtttggtgagagtgaa
gccaatgttcgagaaatattcgacaaggcacgacaatctgccccatgtgttcttttcttt
gatgagctggactctattgcaactcagagaggaagcagtgtgggggatgcaggcggtgcc
gctgatcgggttttgaatcaacttctaactgaaatggatggcatgtcggctaaaaaaact
gttttcattataggggcgacaaacagacctgacattattgaccctgcccttttgcggcca
ggtcgacttgaccagttaatttatattcctctcccagatgaggattcacgccaccagatc
tttaaagcctgtttgagaaagtcaccaatctcaaaagatgttgatctgagagcattggcc
aagtatactcaaggcttcagtggggctgacattacagagatttgccaacgagcttgcaag
tatgccattagggaaaatatagaaaaggatatcgagagggagaggagaagaagggacaat
cctgaggcaatggatgaggatgctgctgaggacgaagtggcagagattaaggctgctcat
ttcgaggagtccatgaagtttgctcgaaggagtgtcagtgatgctgatatccgcaaatat
caggcatttgctcagacgctgcagcagtcccgcggtattggatctgaatttaggtttgca
gaggcaggaactggggctacgactggtgctgatccgttttcaacctctgctggtggggct
gatgacgatgatctgtatagttag
DBGET
integrated database retrieval system
