KEGG   Citrus x clementina (clementine): CICLE_v10027934mg
Entry
CICLE_v10027934mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cic03016]
    CICLE_v10027934mg
Enzymes [BR:cic01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     CICLE_v10027934mg
Transfer RNA biogenesis [BR:cic03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    CICLE_v10027934mg
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 zf_CCCH_4 zf-CCCH_2 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 18035251
NCBI-ProteinID: XP_006423517
UniProt: V4S8I9
LinkDB
Position
Unknown
AA seq 693 aa
MAESAAELSESRVLPADSPPPQPNSTGVPVHNLMPEELVAKAIAPVKKQFLRPPPTRANQ
NDTVKYTNERSSQQHSSTLVKEKKSKRQLKRERHQEKKSASHLCPEVAKSGDVSSCPYKD
KCRFSHDLDGFKAQKPDDLEGECPFLSSEGPCPYGLACRFSGTHRDVVDVAGSTNTLRKS
SEVNGLNKDVQKLLWKNKMKFPKADAKLKSLGLLGPAKSKMKVMEDKEQEGVVDSNNSHA
TNGNGCMKGTGDSVDESECSPCVPEENNIINDRPLKKAKSENVENCCSVEGDNGVSVLEE
DTRNNTADTQPAAKIDDILPETDGSLKTHSREKKLIDFREKLYLAPLTTVGNLPFRRVCK
VLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQC
TVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKN
RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYL
DWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHWG
SDKKGVETTRHFLLEWLSYTCRYIPVGLLDVIPQRLNWRPPAYSGRDDLETLMASDSAAD
WIRISEMLLGKVPDGFTFAPKHKSNAYDRAENG
NT seq 2082 nt   +upstreamnt  +downstreamnt
atggccgagtccgcagccgaactcagtgagtcccgggttcttccggcggactcaccgcca
ccacaaccgaattcaaccggagttccggttcataatctaatgccagaggagctcgtggcc
aaagccatagctccagttaagaaacagttccttcgtcctccgccgacaagagccaatcaa
aacgacaccgttaaatataccaacgagaggtcatctcagcagcactcgtcgaccttagtc
aaggaaaagaaatcaaaacggcaactcaaacgtgaacgtcatcaggaaaaaaaatctgct
agtcatctttgtcctgaagtagctaagagtggagatgttagttcgtgcccttataaagat
aagtgccgattcagccatgacttagatggcttcaaggctcagaaaccggatgatctagaa
ggtgaatgcccgtttttgagttctgaagggccgtgtccttatggtttggcctgcagattt
tcgggtactcatagagatgttgttgatgttgctggttctacaaacacgctgcggaaaagc
tctgaggtgaatggtttgaacaaagatgtgcagaaacttttgtggaagaataaaatgaaa
ttcccaaaagctgatgccaaactcaaatctcttgggcttctgggtccggccaagtcaaaa
atgaaagtgatggaagataaagagcaagaaggtgtagttgattctaataattctcatgct
accaacggaaatggttgcatgaaaggaactggtgactcagtggatgaatctgaatgctca
ccctgtgttccagaagagaataatattatcaatgataggccattgaagaaagcaaaatct
gaaaatgttgaaaattgttgctctgttgaaggggacaatggtgtgagtgtattggaggaa
gatactaggaataacactgcagatactcaaccagcagctaaaattgatgatatactccct
gaaactgatggaagtttaaaaacacattctcgtgaaaagaagcttattgattttagagaa
aagctttatcttgcacctctgaccactgttgggaatcttcctttccgaagggtttgcaaa
gtactgggagcagatgtaacatgcggtgaaatggcaatgtgtacaaatcttttgcaggga
caagcttcagaatgggctctgctgagacgacattcatcagaagatttgtttggtgtacag
atatgtggggcatacccagacactctggcacgcacagttgaacttattgatcagcaatgc
acagtggacttcattgatattaacatgggctgtccaattgacattgttgttaacaagggt
gctgggtcttgtcttcttacaaagccaatgcggatgaaaggcattattgaagctacttct
ggtacagtggacaaacctataactattaaggtgcgaactggctattttgaaggaaaaaac
cgcattgattctttaatagcagatataggcacttggggagccagtgcggtgacagtacat
ggtcggacacgtcagcaacgctatagcaagcttgctgattgggactacatataccaatgt
gcaagaaaggcctctgatgatctgcaagttcttggaaatggtgatatttattcatattta
gactggaacaagcataaatctgactgccctgagctcgcttcctgtatgattgctcgagga
gccctaattaagccttggatattcactgaaataaaggagcagaggcactgggacatcact
tctggcgaacgtttaaatattatgaaggattttgcacggtttggccttgaacattgggga
tctgacaagaaaggagtggaaacaactaggcatttcttattggaatggcttagctacact
tgcagatacatacctgttggccttttagatgtcatcccacaaagactgaactggcgtcca
cctgcctactctggtcgtgacgaccttgagacactgatggcctctgattctgcagctgac
tggattcgaatatctgagatgttgcttggcaaggtgcctgatggtttcacatttgcaccg
aagcacaaatccaatgcatatgaccgagcagaaaatggctaa

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