Citrus x clementina (clementine): CICLE_v10027964mg
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Entry
CICLE_v10027964mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CICLE_v10027964mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10027964mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CICLE_v10027964mg
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CICLE_v10027964mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
18035147
NCBI-ProteinID:
XP_006424722
UniProt:
V4SBR4
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MSGLLNQSSLNGSASNIPDGTGRSFATSFSGQSGAASPGFHHNGTIQGLHNIHGSFNVAP
MQGTLASRNSTINNVPTGGVQQPTGSLSSGRFASNNLPVALSQLSHGSSHGHSGVANRGG
ISVVGNPGFSSNTNGVGGSIPGILPTSAAIGNRNLGQGMGVSPILGNAGPRITSSMGNMV
GGGNIGRSMGSGGGLSVPSSLASRLNLTANSGSGSLNVQGQNRLMSGVLPQGSPQVISML
GNSYPTAGGPLSQSHVNNLSSMGMLNDVNSNDSSPFDINNDFPQLTSRPSSAGGPQGQLG
SLRKQGLGVSPIVQQNQEFSIQNEDFPALPGYKGGNAEYGMDLHQKEQLHENTMSMMQSQ
HFSMGRSAGFNLGGTYTSHRPQQQQQHAPSVSSSGVSFSSVNNQDLLHLHGSDMFPSSHS
SYHSQTSGPPGIGLRPLNSQNPVSGMGSYDQLVQYQHQNPSQFRLQQMSAVNQSFRNQDM
KSIQAAHSTPDPFGLLGLLSVIKMSDPDLTSLALGIDLTTLGLNLNSTENLHKTFGSPWS
DEPAKGDPEFTVPQCYYAKQPPALHQGYFSKFTVETLFYIFYRCFSLIYFCFVLDTSSKP
FFFFCT
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttacttaatcaatcttccctcaacgggtcggcttcgaatattccggacggc
actgggcgatcttttgctacatctttctctggacagtctggtgcggcttctcctggtttc
catcacaatggaactattcaaggacttcataacattcatgggagctttaatgtggcccca
atgcagggtacacttgcatcaaggaattcaacaataaataacgtgccaactggtggggtt
caacaacctactggaagcctttctagtggaagatttgcatcaaacaaccttcctgtcgct
ctctctcagttatctcatggaagctcccatggacactcaggagtcgcaaacagaggaggt
ataagtgttgttggaaatcctggatttagtagtaacacaaatggagttggtggatctatt
ccggggattcttccaacatctgcggcaattggtaaccgtaatcttggtcaaggaatggga
gtttccccaattttgggaaatgcaggtcctcggataacaagttcaatgggaaatatggtt
ggtggaggcaacattggaaggagcatgggttctggtgggggtttatctgtgcctagtagt
cttgcatctcgtttaaatctaactgcgaatagtggatctggaagtctaaatgtgcaagga
caaaatagattgatgagtggcgtacttcctcaaggatctccacaggtaatttctatgcta
ggaaactcttatcctactgctggtggtccactttcccaaagtcatgtgaataatctcagc
tctatgggaatgttgaacgatgtcaactctaatgacagttccccttttgacataaacaat
gatttccctcagttgactagtcgtcctagttcagctggtgggcctcaaggacaattgggt
tctctacgaaaacaaggtcttggagttagccctattgttcaacaaaaccaagagtttagc
atacaaaatgaagattttccagctttgcctggatataaaggtggtaatgctgaatatggt
atggatttgcaccagaaagaacaacttcatgagaataccatgtcgatgatgcaatctcag
cacttctctatggggagatctgcagggttcaatctaggtggaacttatacatcccatcgc
cctcagcagcaacagcagcatgcaccatcagttagtagtagtggtgtctccttctcatct
gttaacaaccaggatcttctccatctgcatggctcagatatgttcccatcttcgcattct
tcctatcactcacagaccagtggaccacccggcattggactgagacctttaaattctcaa
aatccggtttcgggcatgggctcatacgatcagcttgtccagtatcaacatcagaaccca
tcccaatttcgccttcaacagatgtctgcagtcaatcagtcatttagaaatcaggatatg
aaatccatacaggcagcacattctactcctgacccatttggcttgctgggcttgttaagt
gtaataaaaatgagtgatcctgatctcacatcgctggctcttgggattgaccttacgaca
cttgggttgaacttgaattcaacagaaaatcttcacaaaacttttggttcgccgtggtct
gatgaaccagcaaagggtgacccagagttcactgtgccgcaatgttattacgctaaacaa
ccacctgctctacatcaaggttatttttcaaagttcacggtggagacattattttatata
ttctacaggtgcttctctttaatttatttttgtttcgttttggatacctcttcaaaacct
tttttttttttttgcacttag
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