Citrus x clementina (clementine): CICLE_v10027999mg
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Entry
CICLE_v10027999mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03015
mRNA surveillance pathway
cic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CICLE_v10027999mg
09123 Folding, sorting and degradation
03018 RNA degradation
CICLE_v10027999mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10027999mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10027999mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CICLE_v10027999mg
mRNA cycle factors
Stress granule specific factors
CICLE_v10027999mg
Spliceosome [BR:
cic03041
]
Complex C
Other components
Complex C specific factors
CICLE_v10027999mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_3
RRM_7
RRM_RdRP1_2
RRM_MARF1
DUF5062
MinC_N
GH97_C
PABC_AtC3H46
PH_35
Motif
Other DBs
NCBI-GeneID:
18034047
NCBI-ProteinID:
XP_006422975
UniProt:
V4SBL9
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MAQVQAQGQNVNGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLS
TRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLD
KAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDK
QVYVGHFLRKQERDTEINKSKFTNVYVKNLSESTTEEDLQKSFGEYGTITSAVVMRDGDG
KSKCFGFVNFENSDDAARAVEALNGKKFDDKEWYVGKAQKKSERELELKHQFEQNMKEAA
DKFQGANLYIKNLDDSIDDEKLKQLFSPFGSITSCKVMRDPSGISRGSGFVAFSTPEEAS
RALLEMNGKMVVSKPLYVALAQRKEDRRARLQAQFAQMRPVAMASTVAPRMPMYPPGGPG
IGQQIFYGQGPPAMIPPQPGFGYQQQLVPGMRPGGGPMQNFFVPIAQPGQQGQRPSGRRA
AGMQQNQQHVPMMQPQMLPRGRVYRYPSGRGMPDVSMPGVGGMLPIPYGDMAAMPLRDAP
ISQPVPIGALASALANASPEQQRTMLGENLYPLVEQLEPDAAAKVTGMLLEMDQTEVLHL
LESPEALKAKVAEAMEVLRNVAQQQQAGNPADQLASLSLNDNLVS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttcaagctcaggggcagaacgtgaacggaggtggggccaatgcgaatcaa
ttcgggacgacgtcgctttacgtcggggatctggaggcgaacgtgacggattcgcagctg
tacgatctgtttaatcaaatgggtcaagtggtttcggttcgggtttgtagggacttgtcg
acccgacgatctctcggttacggctacgttaacttcagtaacgcacaggaagctgcaagg
gcattggagatgctgaacttcacacctctgaatggaaagcccattagggttatgtattct
catcgtgacccaagtcttcgcaaaagtggcgcagggaatattttcattaagaacctagat
aaggccattgatcacaaagctttgcacgataccttttctgcttttgggaacattctctct
tgcaaggttgctacagacctcaatggtcagtcaaagggctatggatttgtacaatttgac
aatgaggagtctgcccaaaaagctattgagaagttgaacggtatgttattgaatgacaag
caagtttatgttggacatttcctccgcaagcaggagagagatactgagatcaacaagagc
aaattcaccaatgtttatgtgaagaacctctcagagtcaacaactgaagaagatctgcag
aaaagttttggtgaatatggcacaatcacaagtgctgttgtgatgagggatggggatggc
aaatcaaaatgctttggatttgtcaactttgagaattcggatgatgctgctagagcagtt
gaggctcttaatggaaagaaatttgacgataaggagtggtatgttgggaaagcccaaaag
aaatctgaaagagaacttgaattgaaacatcaatttgagcagaatatgaaggaagcagct
gacaaatttcagggagcaaacttatatattaaaaatttagatgatagcatagatgatgaa
aaacttaagcagctgttctctccatttggtagcatcacatcatgcaaggtaatgcgagac
ccaagtggaattagtagaggatccgggtttgttgcgttctcaactcctgaagaggcatct
agagctcttctggagatgaatggcaagatggttgtctccaaaccgctttatgttgctctt
gcccaacgcaaggaagatagaagagctaggttgcaggctcaatttgcacaaatgaggcca
gttgcaatggcttctacagtcgctcctcgaatgccgatgtaccctcctggtggtccaggt
attgggcaacaaatattctatggtcaaggcccgcctgctatgattcctcctcagcctgga
tttggttatcagcagcagcttgttcctggtatgaggccaggtgggggtcccatgcaaaat
ttctttgtgccgatagctcagccagggcagcagggtcagcgtcctagtggcagacgggca
gcaggcatgcagcagaaccagcagcatgttccaatgatgcagccacagatgcttccaagg
gggcgtgtctaccgctacccgtcaggccgtggcatgccagatgtttccatgcctggtgtc
ggagggatgctacctattccatatggtgacatggctgctatgccgctgcgtgatgcccct
atttcacagccagttcccattggggctttggcttctgcccttgcaaatgcttctcctgag
cagcagaggacgatgctgggagagaatctctacccacttgtagaacagctggagcctgat
gctgcagctaaggttacgggaatgcttttggagatggatcagactgaggttttgcacttg
ctcgagtcaccagaagctctgaaagcgaaagtggctgaggcaatggaggttctgaggaat
gttgctcagcaacagcaggctggtaatccggctgatcaactagcctcattatcattgaat
gataacttggtttcttaa
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