Citrus x clementina (clementine): CICLE_v10028537mg
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Entry
CICLE_v10028537mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00100
Steroid biosynthesis
cic00909
Sesquiterpenoid and triterpenoid biosynthesis
cic01100
Metabolic pathways
cic01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
CICLE_v10028537mg
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
CICLE_v10028537mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cic01006
]
CICLE_v10028537mg
Enzymes [BR:
cic01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
CICLE_v10028537mg
Prenyltransferases [BR:
cic01006
]
Terpene biosynthesis
Squalene/phytoene synthase
CICLE_v10028537mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
18034962
NCBI-ProteinID:
XP_006423442
UniProt:
V4S8C8
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MGSLAAVLRHPDDLYPLLKLKMASRQAEKQIPSEPHWAFCYSMLHKVSRSFALVIQQLGT
DLRNAVCIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHVYDREWHFSCGTKEYKVLMD
QFHHVSTAFLELGKGYQDAIEDITKRMGAGMAKFICKEVESIDDYDEYCYYVAGLVGLGL
SKLFYASGTEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKCRMFWPREIWSKYVNKL
EDLKYEENSDKAVQCLNDMVTNALMHVEDCLKYMSVLRDHAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTNNMTDVYLAFYDFSNILKPKINKNDPNATKTLSRV
EAIQKACMDSGVLNKRKSYIIQSGLRYSSTMIVIFFIILAIIFSYLSSTRASK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttggcagcggtgttgaggcacccagatgatctttacccgttattgaagctg
aaaatggcatcgaggcaagctgaaaagcagatcccatctgagcctcactgggctttttgt
tactctatgcttcataaggtctccagaagtttcgctctcgttattcaacagctcggtact
gacctcagaaacgccgtttgcatattttatttggttcttcgagccctcgacactgttgag
gatgacaccagcatacctacagatgtcaaagtgcctattctgatagcttttcatcgtcat
gtttatgaccgtgaatggcatttttcttgtggtacaaaggaatacaaagtgctcatggat
caatttcatcacgtttcaactgcttttctggagcttggaaaaggttatcaggatgcaatt
gaagatataaccaaaagaatgggtgctgggatggcaaaattcatttgcaaagaggtagag
tcgatcgatgactatgatgaatattgttactatgtagcaggacttgttggattaggtctg
tccaagcttttctatgcctctgggacagaagatctggctccagatagtctttccaactcg
atgggtttatttcttcagaaaacaaatatcattcgagattatctggaagatattaatgag
ataccgaagtgtcgcatgttttggcctcgtgagatctggagtaaatatgttaataaactt
gaggacttaaaatatgaggaaaactctgacaaagcagtacagtgcttgaatgatatggtc
accaatgctctgatgcatgtggaagattgtttgaagtacatgtctgttttaagggatcat
gctatattccgattctgtgctatccctcagatcatggctattggaacactagcattatgc
tacaacaatattgaagtcttcagaggtgtagtcaaaatgaggcgtggactcaccgctaaa
gtcattgaccgaacaaacaacatgactgatgtctatcttgccttctatgatttttccaat
attctgaaacccaagattaacaagaatgatccaaatgcgacaaaaacattgagcagggtg
gaagcaatacagaaagcttgcatggactccggagtcctaaacaaaagaaaatcttacatt
attcaaagtgggctgcgatatagttcaaccatgattgtcatatttttcatcatactggcc
attattttctcgtacctctcttccacccgagcaagcaagtag
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