Citrus x clementina (clementine): CICLE_v10028562mg
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Entry
CICLE_v10028562mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03082
ATP-dependent chromatin remodeling
cic03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CICLE_v10028562mg
03083 Polycomb repressive complex
CICLE_v10028562mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10028562mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
CICLE_v10028562mg
Histone modification proteins
HAT complexes
HATB complex
CICLE_v10028562mg
HDAC complexes
Sin3A-HDAC complex
CICLE_v10028562mg
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
CICLE_v10028562mg
PRC2.2
CICLE_v10028562mg
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
CICLE_v10028562mg
Heterochromatin formation proteins
Other heterochromatin formation proteins
CICLE_v10028562mg
Chromatin remodeling factors
NuRD complex
CICLE_v10028562mg
NuRF complex
CICLE_v10028562mg
NuRF complex (fruit fly)
CICLE_v10028562mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD_LRWD1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
MIOS_WD40
Beta-prop_HPS5
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
18033859
NCBI-ProteinID:
XP_006422592
UniProt:
V4S624
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MAAEEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFA
VHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNR
ARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDDCDPDLRLKGHDKEGYGLSWSPFKEG
YLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQL
MIWDLRTNQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDMRKMTVPLHILSS
HTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQLELDAEDGPPELLFSHGGHKA
KISDFSWNKNDPWVISSVADDNTVQVWQMTDSIYRDDDDFLAATDD
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaggagcaagacgcgagcttggatcaagtggaggaggagttcacggtatgg
aagaagaacacgccgtttttgtacgatctgattgtctctcacccgttagagtggccttcg
cttaccgtccactgggtcccatcgcctccgcaaccctactcagcggaccccactttcgcg
gtgcacaagttcgtgctcgggacccacacctccgaggattttcccaactttctcatgatc
gccgatgctgtgctgcccaccaaagactcggagtctaacgtcggcggcaaaaatgaaaat
cctgtcatccccaaggtggagatagcgcagaagatacgtgttgatggggaagtgaataga
gcacggtgtatgccacagaaacccaatcttgttggtacaaagactagcagttgtgaggtg
tatgtgtttgactgtgccaaacaggcagaaaagcagcaagatgattgtgatcctgatctg
aggttgaagggtcatgataaagagggttatggattgtcttggagtccctttaaggaaggt
tatcttgtgagtggttcccatgacaataagatttgcttgtgggatgtgtctgcgttggct
caagacaaagtgattgatgcaatgcatgtctatgaggctcatgaaagtgtggttgaagat
gtgtcgtggcatttgaagaatgagaatttatttgggtctgcaggcgatgattgccaactg
atgatctgggacttgcgcactaatcaaactcaacagcgtgtaaaagctcatgagaaagag
gttaactatctatcttttaatccatacaatgaatgggttctggcgactgcatcttcagac
actactgttgctttgtttgatatgcggaagatgactgtgccgttacacattttaagtagt
cacacagaagaagtgttccaggtagaatgggatcctaatcacgaaaccgtgctggcttct
tcagctgatgacagaaggctcatggtttgggaccttaacaggattggggacgagcagttg
gaattagatgccgaggatggtcctcctgagctccttttctctcatggaggtcacaaggcc
aagatatcagatttctcttggaacaaaaatgacccgtgggtcatttcaagtgtagccgac
gacaatactgttcaggtctggcaaatgacagacagcatttaccgtgatgacgatgatttt
ctagccgccacagatgattag
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