Citrus x clementina (clementine): CICLE_v10029160mg
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Entry
CICLE_v10029160mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03013
Nucleocytoplasmic transport
cic03015
mRNA surveillance pathway
cic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10029160mg
09122 Translation
03013 Nucleocytoplasmic transport
CICLE_v10029160mg
03015 mRNA surveillance pathway
CICLE_v10029160mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10029160mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10029160mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CICLE_v10029160mg
TREX complex
CICLE_v10029160mg
Spliceosome [BR:
cic03041
]
Complex C
Other components
EJC/TREX
CICLE_v10029160mg
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CICLE_v10029160mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
RRM_3
Kdo_hydroxy
Motif
Other DBs
NCBI-GeneID:
18034334
NCBI-ProteinID:
XP_006424776
UniProt:
V4SBX0
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSGPGPARRIPNRGANRVAPYTTAKAPETTW
QHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY
DRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNIATRTAAPAANVNFG
NSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNEKISAEDLDADLDKYYSEA
SEAMQTN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcgctttagatatgtctcttgacgatatcatcaagaacaacaaaaagtctgga
tctggcaacttccggggccggggtcgaggatccggacccggccctgctcgtcgcatcccc
aatcgtggtgcaaaccgtgtggcgccgtataccaccgccaaagcgccggagacgacgtgg
cagcacgatatgtttgcagatcaggtgagtgctttcccggtacagcaggcggggcgggct
tcagctatagagactggaacgaagctgtacatatcaaatctggattacggtgtctctaat
gaagacatcaaggaactgttttctgaagttggtgacttgaagcggtactcaatccattat
gatagaagtgggagatcaaagggaacggcagaggttgtctattcacgacgagcagatgct
gtggctgcagtcaagagatacaacaatgtgcagcttgatgggaagccgatgaaaattgag
attgtgggaacaaacattgcaacccgtactgcagctccagctgctaatgtcaactttgga
aattcaaatggtgttcctagaggtggacaaggaagaggtggtgcattcagaaggcttcgt
ggaggtgggggtggcggcggccgtggatttggaagaggtcgtggacgtggaagagaacgt
aatgagaagatatctgctgaagatcttgatgctgatttggacaagtattattcagaagca
tcagaggcaatgcagacaaattga
DBGET
integrated database retrieval system