Citrus x clementina (clementine): CICLE_v10029292mg
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Entry
CICLE_v10029292mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K07897
Ras-related protein Rab-7A [EC:
3.6.5.2
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04142
Lysosome biogenesis
cic04144
Endocytosis
cic04145
Phagocytosis
cic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CICLE_v10029292mg
04145 Phagocytosis
CICLE_v10029292mg
04142 Lysosome biogenesis
CICLE_v10029292mg
04148 Efferocytosis
CICLE_v10029292mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10029292mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cic04147
]
CICLE_v10029292mg
04031 GTP-binding proteins [BR:
cic04031
]
CICLE_v10029292mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.2 small monomeric GTPase
CICLE_v10029292mg
Membrane trafficking [BR:
cic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
CICLE_v10029292mg
Endosome - Golgi transport
CICLE_v10029292mg
Exosome [BR:
cic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CICLE_v10029292mg
Exosomal proteins of other body fluids (saliva and urine)
CICLE_v10029292mg
Exosomal proteins of colorectal cancer cells
CICLE_v10029292mg
Exosomal proteins of bladder cancer cells
CICLE_v10029292mg
GTP-binding proteins [BR:
cic04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
CICLE_v10029292mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
ATP_bind_1
RsgA_GTPase
AAA_16
nSTAND3
PduV-EutP
AAA_7
Septin
NTPase_1
AAA_22
AAA_24
cobW
ATPase_2
SRPRB
AAA_14
MCM
NB-ARC
NACHT
CATSPERZ_C
ATP-synt_ab
AAA_5
Motif
Other DBs
NCBI-GeneID:
18035217
NCBI-ProteinID:
XP_006423246
UniProt:
V4SHI2
LinkDB
All DBs
Position
Unknown
AA seq
206 aa
AA seq
DB search
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
EEEEIYLPDTIDVGNSSQPRSSGCEC
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctcgtagaagaactctcctcaaggtcatcatcctcggcgacagcggggtgggc
aagacctctttgatgaatcaatatgtaaacaagaagtttagcaatcagtacaaggcgacc
atcggagctgatttcttgacaaaggaagtgcagtttgaagataggctcttcaccttacag
atctgggatacagctggtcaggaaagattccaaagcctgggtgttgctttctaccgaggt
gcagattgctgtgtacttgtgtatgatgtaaattctatgaagtcctttgacaacctcaat
aactggagagaagaattcctcattcaggctagcccttcggatccagacaatttccccttt
gttgttttaggaaataagattgatgtagatggtggaaacagtagggtggtttcggagaag
aaggctcgagcatggtgtgcttccaaaggaaatattccttactttgagacctctgcaaaa
gaaggcattaatgtggaagaagctttccagtgcatagctaaaaatgctttgaagagtggg
gaggaggaagagatatacttgccggacaccattgatgttggtaacagcagccagccaagg
tcaagtggatgcgagtgctaa
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