KEGG   Citrus x clementina (clementine): CICLE_v10029292mg
Entry
CICLE_v10029292mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K07897  Ras-related protein Rab-7A
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04144  Endocytosis
cic04145  Phagosome
cic04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CICLE_v10029292mg
   04145 Phagosome
    CICLE_v10029292mg
   04148 Efferocytosis
    CICLE_v10029292mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cic04131]
    CICLE_v10029292mg
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cic04147]
    CICLE_v10029292mg
   04031 GTP-binding proteins [BR:cic04031]
    CICLE_v10029292mg
Membrane trafficking [BR:cic04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    CICLE_v10029292mg
Exosome [BR:cic04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CICLE_v10029292mg
  Exosomal proteins of other body fluids (saliva and urine)
   CICLE_v10029292mg
  Exosomal proteins of colorectal cancer cells
   CICLE_v10029292mg
  Exosomal proteins of bladder cancer cells
   CICLE_v10029292mg
GTP-binding proteins [BR:cic04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    CICLE_v10029292mg
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA ATP_bind_1 RsgA_GTPase nSTAND3 AAA_16 PduV-EutP AAA_7 Septin AAA_24 cobW NTPase_1 AAA_22 ATPase_2 SRPRB MCM NACHT AAA_14 ATP-synt_ab NB-ARC AAA_5
Other DBs
NCBI-GeneID: 18035217
NCBI-ProteinID: XP_006423246
UniProt: V4SHI2
LinkDB
Position
Unknown
AA seq 206 aa
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF
VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG
EEEEIYLPDTIDVGNSSQPRSSGCEC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgccgtctcgtagaagaactctcctcaaggtcatcatcctcggcgacagcggggtgggc
aagacctctttgatgaatcaatatgtaaacaagaagtttagcaatcagtacaaggcgacc
atcggagctgatttcttgacaaaggaagtgcagtttgaagataggctcttcaccttacag
atctgggatacagctggtcaggaaagattccaaagcctgggtgttgctttctaccgaggt
gcagattgctgtgtacttgtgtatgatgtaaattctatgaagtcctttgacaacctcaat
aactggagagaagaattcctcattcaggctagcccttcggatccagacaatttccccttt
gttgttttaggaaataagattgatgtagatggtggaaacagtagggtggtttcggagaag
aaggctcgagcatggtgtgcttccaaaggaaatattccttactttgagacctctgcaaaa
gaaggcattaatgtggaagaagctttccagtgcatagctaaaaatgctttgaagagtggg
gaggaggaagagatatacttgccggacaccattgatgttggtaacagcagccagccaagg
tcaagtggatgcgagtgctaa

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