Citrus x clementina (clementine): CICLE_v10029380mg
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Entry
CICLE_v10029380mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03020
RNA polymerase
cic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CICLE_v10029380mg
09124 Replication and repair
03420 Nucleotide excision repair
CICLE_v10029380mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10029380mg
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10029380mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10029380mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
CICLE_v10029380mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CICLE_v10029380mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CICLE_v10029380mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
RGI1
Vg_Tdu
Motif
Other DBs
NCBI-GeneID:
18035668
NCBI-ProteinID:
XP_006424920
UniProt:
V4SH89
LinkDB
All DBs
Position
Unknown
AA seq
176 aa
AA seq
DB search
MFFHIVLERNMQLHPRHFGRNLREHIISKLMKDVEGTCSGRHGFVVAITSVENIGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVSMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTTI
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgttctttcacatagtgctggagcgaaacatgcagctgcatcctcgccactttggtcgt
aatcttcgtgaacatatcatctccaagctcatgaaagatgttgagggcacttgcagtgga
cggcatggatttgtggtggcgataacgagtgtggaaaatatcgggaagggcctgattcgg
gatgggacagggttcgtgacttttccggtgaagtaccagtgtgttgtttttagacccttt
aaaggggaaattttggaagctgttgtttccatggttaacaagatggggtttttcgctgaa
gctggacctgttcaaatttttgtttcaaatcatttgataccggatgatatggagttccag
tcaggagatatgccaaattacactacctcagatggatcggtgaagattcaaaaggatagt
gaggttcggttaaagataattgggactcgagttgatgccactgaaattttctgcatcggt
accataaaggatgatttcttgggagtgatcaatgatcctacaacgatctag
DBGET
integrated database retrieval system
