Citrus x clementina (clementine): CICLE_v10030378mg
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Entry
CICLE_v10030378mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03015
mRNA surveillance pathway
cic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CICLE_v10030378mg
09123 Folding, sorting and degradation
03018 RNA degradation
CICLE_v10030378mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10030378mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10030378mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CICLE_v10030378mg
mRNA cycle factors
Stress granule specific factors
CICLE_v10030378mg
Spliceosome [BR:
cic03041
]
Complex C
Other components
Complex C specific factors
CICLE_v10030378mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_5
RBD_DEAH11
MLLE
Motif
Other DBs
NCBI-GeneID:
18033761
NCBI-ProteinID:
XP_006424396
UniProt:
V4SKR9
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
TKAIEALNHTILNGKAIRVMWSTPNSEARLSGIGNAFVKNLASTIDNLKLHQIFSKFGDI
QSSKVVVSQEGKSKGYGFVQYSTPESALDAIEKLQGATVERMELYVGPFIRRADRIQEGS
SFNNLYVKNLDDDMTEEILVEKFSEFGKITSLVISKDANGTSKGFGSKVLYVARAQKKAE
RKAILRAQFERMRKEHKNLYVKNINDEVDEIELKQYFSQCGTISSVKIMRTDRGISKGFG
FVCFSNPDEANRAINTLNGILFHQKPLTSYLRIMYAKQGPGLASTIFPVHPTLYQRALQV
YQAPDFRHGGMIPNGFSPPPPSPLFLMAPDSVTQYRGAMMNGHANFPMPLMLSNLQKPSY
NYPISQPRAGQAAANNLTNGNHRAAASNENLSSMLVATSPDERKDILGQRLYPLVKKLKV
ITHIFVKGQFRFIFG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
acaaaggctatagaggcattgaatcatacaatactgaatggtaaagcaattagagtaatg
tggtcgacacccaattctgaagccagattgagtggaattggcaatgcgttcgttaagaac
ttggctagtacaatagacaatttgaagctccatcaaatattttccaaattcggagacatt
cagtcctccaaggttgttgtgtctcaagaagggaaaagcaaaggctatggctttgtccaa
tactcaacgccagaatctgcactcgatgctattgaaaagcttcaaggtgctaccgttgaa
agaatggagctctatgttggtccattcatcagaagggctgacaggattcaagaaggttct
tcatttaacaacctgtacgtcaagaatttagatgatgatatgactgaggagattttggtg
gagaaattctccgagtttggaaaaataacaagtttggttatctcaaaagatgctaacggg
acatctaagggttttggctcaaaagttttgtatgtagcaagggcacagaagaaagctgaa
cgaaaggcaattttacgcgctcaatttgagagaatgcgcaaagagcataaaaatttgtat
gtgaagaacataaatgatgaggttgacgaaattgaattgaaacaatactttagccagtgt
ggcactatcagctctgttaaaatcatgagaactgacagaggtattagcaaagggttcgga
tttgtgtgtttctccaatcctgatgaagccaatcgagccataaacactctaaatggcatc
ctgtttcatcaaaagccattaacttcgtacctacgaataatgtatgcaaagcaagggcca
ggacttgctagcaccatttttcctgtgcatccgactctttatcaacgtgcattacaagtg
tatcaagcaccagacttcagacatggtggcatgattcctaatggattttctcctcctcct
ccttctcctttgtttctaatggctcctgattctgtaacgcaatatagaggagcaatgatg
aatgggcatgctaattttccaatgccacttatgctatcaaatctacagaagccttcttac
aattatccaatctctcagccgagggccgggcaagctgctgccaacaacctgacaaatggg
aatcacagagctgctgcttccaatgaaaatttgagcagcatgcttgttgctacttcccct
gatgaaaggaaagatattcttggccaaagactctacccgctggtgaagaaactcaaggta
attactcatatttttgtcaagggtcaatttcgattcatcttcgggtag
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