Citrus x clementina (clementine): CICLE_v10030390mg
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Entry
CICLE_v10030390mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03013
Nucleocytoplasmic transport
cic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CICLE_v10030390mg
03015 mRNA surveillance pathway
CICLE_v10030390mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10030390mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10030390mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CICLE_v10030390mg
Spliceosome [BR:
cic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
CICLE_v10030390mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Cornifin
LsmAD
Motif
Other DBs
NCBI-GeneID:
18034244
NCBI-ProteinID:
XP_006424900
UniProt:
V4SH69
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKTQKFASELDHLVDMTKVKMDVMKPWIATRVTELL
GFEDEVLINFIYGLLEGKEVNGKEVQISLTGFMEKHTAKFMKELWTLLLSAQKNASGVPQ
QFLDAKEEEARKKKLEADRIANEIQKKEKESRELDKERSRNMDGAVEMKTTNAASVLDSK
TMLEKDSSSYPKDKKEAGEKNGVRGRSRFSRSPLPVAHSPLSHRSSPSRSISKSNSNSRS
YSDDRRKSRSVSRSPKVRRRSISPRRQSITPRRRHSPRRSRSPSRRLSYFRRRSRSHSPR
RSPSPIRRRLRSPFRGKSPMPLRRRSPSPVQHRRSPSPVRRRGSPSPIRRRRSPSPSRRR
RSPPIRRRRSPSPIRRRRSPSPLHHRSPSPTRRISPSPVQRLYQRSPLASHRSPSPIGYR
APMPSHLRSPTPSQRRSPSPYESSSSSPVRRRHPSPVRRTSPYDGRRSTHTHREKYGTYE
KLSPVARRPSSSLRSPQQDLKDRKDLRKRESAFSPSPERSPTVSESPPRLTRKRSTSEDR
SFSPDESPVRQTRERMVFDGNISPSPRPRERRHQDDTETSKEGKENNRARDDGDRKSVLP
HERSVLSATVSRQRGSPVQIRCKKEHSPGSERLSRRGGRPETFEQQRSLALYEGSLSGDR
QRSTYPGESKISEERNRSYRNNGKDSDGRSKTENATMEAGNVDKNNRSDSFDSGSEENGK
HKTKIKDKRKHKKHGREEVASDGDNSYDSEIDKKDAKRRRKEEKKLRREEKRRRRDERRR
RKEERRAAKLKMKNQSDADASDDEHAPRREYRPSDDEETESDQKRLEIELRNKALESIKA
KRNSSH
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggctttttccggggtacgtcggccgatcaagacacgcggttctcgaacaaa
caagccaagctcttgaaaacgcagaaatttgcatctgagttggaccacctggtggacatg
acaaaagtgaagatggatgttatgaaaccgtggattgctactagggtgactgagttactt
ggatttgaagatgaagtgctcatcaacttcatatatggtcttcttgaggggaaggaagtg
aatggtaaggaggttcagatatcgctcactggtttcatggagaaacatactgcaaagttc
atgaaggagctttggacacttcttctcagtgctcagaagaatgcaagtggtgttccacaa
cagttcttggatgccaaggaagaagaggcaagaaagaaaaagttggaggcagatcggata
gcaaatgaaattcagaaaaaggagaaggaaagcagagaacttgacaaagagagatcgagg
aatatggacggtgcagttgagatgaagaccactaacgctgcctcggttctagactcaaag
actatgctggaaaaggattcgagtagctatcccaaggataaaaaggaagctggtgagaag
aatggtgtgagaggaaggagcaggttttcaagatctccacttccagttgctcattcccct
ttatcccatcgaagctcaccttctcggtcaatcagcaaatcaaattcaaattccagaagt
tattcagatgacagacgcaaatcaaggagtgtatctcgatcacccaaggtgcgaagacgc
tccatttctccgagaagacagtccattacacctcgtaggaggcattcacctcgaagatca
cgctctccttcaagaagattgtcttattttagacgaagatctaggtcacattcgcctcgt
agatcaccatctcccatacggcgtaggctgcgttccccttttcgtggtaaatctccaatg
cctctacggcgcagatcaccatcacctgtacaacatcgtagatcaccatcacctgttcgg
cgtcgtggatcaccatcaccaattcgacgtcgtagatctccatcaccttctcgtcgacga
agatctccacctattcggcgccgtcgatctccttcaccaatacggcgccgtcgatctcct
tcacccttgcatcataggtcaccatcacccacaaggcgtatatctccctctcctgtgcaa
cggctgtatcagcggtctccattggcatcgcataggtctccttctccaattgggtacagg
gcacccatgcctagccacttgagatcaccaactccttcccagcgtaggtccccttcacct
tatgaatctagttcttcatctcctgttcgacgtaggcacccttcaccagttaggaggaca
tctccctatgatggcaggagatcaacacatactcacagagaaaaatatggaacctatgaa
aaattgtctcctgtggcacgccgaccttccagctctttgaggtcaccacagcaagatcta
aaagacaggaaagatttacgtaaaagggaatcagctttttcaccttcacctgaaaggtca
ccaactgtttcggaatctccacctcgtttaacaaggaaaaggagtactagtgaggacagg
tcatttagtccggatgagagccctgtgaggcagactagggagcggatggtctttgatggc
aacataagtccttctccaagaccaagggaacggagacatcaggatgatacagaaacaagc
aaagagggcaaagaaaataatcgtgcaagggatgatggagatcgtaaatctgttctacca
catgaaagatctgtactctcagctacagtcagtaggcagagaggttctcctgtgcaaatt
cgctgtaagaaagagcattcacctgggagtgagagattgtctaggaggggtggtcgtcct
gaaacttttgaacaacaaagatccctagcactatatgaaggctccttgtccggtgatagg
cagcggtcaacctaccctggagaaagtaaaatatctgaggagagaaaccgctcttataga
aataatggcaaggacagtgatggacgcagtaaaactgagaatgcaacaatggaggctgga
aatgttgataaaaataataggagtgattcttttgattccggttccgaggaaaatggcaag
cacaaaactaagatcaaggataagagaaagcataaaaaacatggtagggaggaagtagct
tcagatggtgacaacagttatgattctgaaatagataagaaggatgctaaaaggaggagg
aaggaagaaaagaaattacgaagagaagagaagcgtcgacgacgtgatgagcgacgtcgt
agaaaggaagaacgacgtgcggcaaagctgaaaatgaagaatcaaagtgatgctgatgct
tcagatgatgaacatgcacctaggagggagtatcgtccaagtgatgatgaagagacagaa
tctgaccagaagagacttgagattgagttacgaaataaggctctggaatcaattaaagcg
aagaggaacagcagtcactaa
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integrated database retrieval system
