Citrus x clementina (clementine): CICLE_v10030472mg
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Entry
CICLE_v10030472mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10030472mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
CICLE_v10030472mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_ECM29
TOR1L1_N
HEAT_EZ
HEAT_2
TPR_Trm732_C
HEAT_GCN1
HEAT_GCN1_C
HEAT_MROH2B_C
CLASP_N
UTP20
Motif
Other DBs
NCBI-GeneID:
18045720
NCBI-ProteinID:
XP_006437321
UniProt:
V4TL62
LinkDB
All DBs
Position
Unknown
AA seq
2041 aa
AA seq
DB search
MAQQSSRLNRLLTLLDTGSTQATRFTAARQIGEIAKTHPQDLNSLLRKVSQYLRSKSWDT
RVAAAHAIGAIAQNVKLTTLKELFSCVETKMSEVGISGIVEDMVAWPNFHSKIVASVSFT
SFDLNKVLEFGALLASGGQEYDIAIDNSKNPRERLARQKQNLKRRLGLDVCEQFVDLNDM
IKDEDLIVHKLNSHGNGFDRRFYTSASAHNIQRLVSSMVPSVISKRPSARELNMLKRKAK
ISSKDQSKSWSEDGDMEVPHAQNVTTPKGSCGDPFNSNKADAVLDEDSSEHEGDGLWPFR
SFVEQLILDMFDPVWEVRHGSVMALREILTHHGASAGVFMPELGPDGALNVEFKDKDSIT
MKREREIDLNVQVPADEPEPLLKKMKFEDAPPPLMDTMVSPVNCDGCNISIKVDDSGCNL
PAGSVNGQLDLSSVKVEPESNLDGLSHPSKEAIDILEPRGQSGEKGDFLNSETLKNLPEN
SELMNWLKLARHSWQKNCEFLQDCAIRFLCILSLDRFGDYVSDQVVAPVRETCAQALGAA
FKYMHPSLVYETLYILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLHGLLGYVLPACRAG
LEDPDDDVRAVAADALIPTAAAIVALDGQTLHSIVMLLWDILLDLDDLSPSTSSVMNLLA
EIYSQEEMIPKMVGATSKQEFDLNEVVRADDVGEGRDFQANPYMLSMLAPRLWPFMRHSI
TSVRHSAIRTLERLLEAGYKRMIAESSGGSFWPSFILGDTLRIVFQNLLLESNEEILQCS
DRVWRLLVQSPVEDLEAAGGKFMSSWIELATTPFGSSLDATKMFWPVALPRKSHFKAAAK
MRAVKLENDSSGSVDLPQERNGDTSTNSVKITVGSDLEMSVTNTRVVTASALGIFASKLH
EGSIQFVIDPLWNALTSFSGVQRQVAAMVFISWFKEIKSEELPGSAAVLPNLPGHLKQWL
LDLLACSDPTYPTKDSLLPYAELSRTYGKMRNEASQLLRAMETSGMFTEMLSANEIDVES
LSADNAISFASKLQLLGSNSDGSESLSRQMLDDIESIKQRMLTTSGYLKCVQSNLHVTVS
ALVAAAVVWMSELPARLNPIILPLMASIKREQEEKLQEKAAEALAELIADCIARKPSPND
KLIKNICSLTSMDPCETPQAAAMGSMEIIDDQDFLSFGSSTGKQKSRAHMLAGGEDRSRV
EGFISRRGSELALRHLCGKFGVSLFDKLPKLWDCLTEVLIPDGPSNKKKIILAIESVRDP
QILINNIQLVRSIAPMLDEALKPKLLTLLPCIFKCVCHSHVSVRLAASRCITSMAKSMTI
NVMAAVVENAIPMLGDMTSVHARQGAGMLISLLVQGLGAELVPYAPLLVVPLLRCMSDCD
QSVRQSVTRSFASLVPLLPLARGVSPPTGLTEGLSRNAEDAQFLEQLLDNSHIDDYKLGT
ELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAERRASNSIEE
IHPSLIICPSTLVGHWAFEIEKFIDVSLMSTLQYVGSAQDRIALREQFDKHNVIITSYDV
VRKDADYLGQLLWNYCILDEGHIIKNSKSKITVAVKQLKAAHRLILSGTPIQNNITDLWS
LFDFLMPGFLGTERQFQATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQVMPFLLRRTK
DEVLSDLPEKIIQDRYCDLSAVQLKLYEKFSGSQAKQEISGMVKVDESADKGEGNNVSAK
ASTHVFQALQYLLKLCSHPLLVLGDKIPESLLCHLSELFPGSSDIISELHKLHHSPKLVA
LQEIMDECGIGVDGSSSENAVNVGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDG
SVESERRFDIVKAFNSDPTIDALLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDR
AHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLFA
SAETPKKGGGVSKLSDVDGDPKLMGTGKGLKAILGGLEELWDQSQYTEEYNLSQFLAKLN
S
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaatcgtcacgtctcaatcgtttgctcactttattggacactggctcaacg
caagcaaccaggtttacagccgcgcggcagattggggagattgctaaaacacatccccaa
gacttgaattcattactgaggaaggtatcacaatatcttcggagtaaaagttgggatacg
agggtagctgctgctcatgctattggggcaattgctcagaatgttaagctcacaactttg
aaggaattattttcctgtgtggaaacaaagatgtctgaagttgggatatctggtattgtg
gaggacatggtggcatggcctaattttcattctaaaattgtagcaagtgtttcatttaca
agctttgacctcaacaaggttttagagtttggtgctttgttagcatctggaggacaggag
tatgatattgcaattgataattccaagaatccgagggaacggttggctcggcagaagcaa
aatcttaaacgtcgtttgggtttggatgtctgtgagcagtttgtggatttaaatgatatg
atcaaagatgaagatcttattgttcacaaattaaattcccatggaaatgggtttgaccgt
agattttacacttctgcatctgcacataatatccaacggctagtttcaagtatggttcca
agtgtcatttctaagaggccaagtgctagagaattgaatatgttaaagagaaaagcaaaa
ataagttcaaaagaccaatcaaaaagctggtctgaggatggagatatggaggtcccccat
gctcaaaatgtgacaacaccaaagggatcatgtggggatccattcaattccaataaggca
gatgctgttcttgatgaggacagctcagagcatgagggagatgggctttggcctttccgt
agttttgttgagcaactcatccttgatatgtttgatcctgtttgggaggttcgccatggg
agcgttatggctttaagagaaattttaacccatcatggtgcttctgctggagtgtttatg
cctgagttgggtccagatggagcactaaatgttgaatttaaagacaaagactcaattaca
atgaagagagagagagaaattgatttgaatgtgcaagttccagctgatgagccagagccc
cttctaaaaaagatgaagtttgaagatgcaccccctcccttgatggatacgatggtgtct
cctgtgaattgtgatggctgtaatatcagcataaaggttgacgatagtggttgcaatcta
cctgcagggtcagtcaatgggcaacttgatcttagttctgttaaggtggagccagaatct
aatcttgatggtttatcccatccatccaaagaagctattgacatattagagccaagggga
caatctggggagaagggggactttctaaattctgaaaccctgaaaaatcttcctgaaaac
agtgagcttatgaactggttgaaactagctaggcattcttggcagaaaaactgtgaattt
cttcaagattgtgcaattcgtttcttatgtatattatcactggaccgttttggagattat
gtatctgatcaggtcgttgctcctgtaagggaaacctgtgcccaagctttaggtgctgct
tttaagtatatgcatccttccttagtttatgagacattgtatatcttgttgcaaatgcag
cgtagaccagaatgggaaattcgtcatggtagccttttgggcatcaagtacttggttgct
gtgcgacaggagatgctgcatggtctactaggctatgttctgcctgcatgtagagctggg
ttggaggaccctgatgatgatgttcgagcagtggctgcagatgctttaatacccactgca
gctgctatcgttgctttagatggtcaaacattgcattcaattgttatgctactttgggat
atattgctcgatttggatgatctaagcccgtccactagtagtgtgatgaatctgttggcg
gaaatctactcgcaggaagagatgattcctaaaatggttggggctacatctaaacaggaa
tttgatctaaatgaagtagttcgtgctgatgatgttggagaaggaagagattttcaggca
aatccttacatgttatcaatgctggcccctcgattatggccatttatgaggcatagcata
acatcagtccgccattcagctattcgtactttggagcgacttcttgaagctggttacaaa
aggatgattgcggagtcctcaggtggttctttttggccatcttttattttgggtgatact
cttaggattgtttttcagaatctgctgctggaatcaaatgaagaaattctgcagtgttca
gatagagtttggagactgcttgttcagagccctgtcgaggacttggaagctgctggtggt
aaatttatgtcttcctggatagaacttgctacaacaccttttggttcatcattagatgct
acaaaaatgttttggcctgtagctcttcctcgaaaaagtcattttaaagcagcagcaaaa
atgagagctgtgaagcttgaaaatgattcgtctggaagtgttgatcttccacaggaaaga
aatggagatacttcgacaaactcggttaagataactgttggttctgacttggaaatgtcg
gtgacaaatactcgagttgtaactgcatcagcattgggcatttttgcttctaagttgcat
gaaggatctatacagtttgtaattgacccactttggaatgcccttacctctttctctggg
gtccagcggcaggtggcggccatggttttcatttcctggttcaaagagatcaaaagcgag
gaacttcctggatctgcagcagttttgcctaatcttcccggtcatctcaaacagtggttg
ttggatttgttagcatgctctgaccctacgtaccccacaaaagattcacttcttccctat
gctgagctttcaagaacgtatggcaagatgcggaatgaagccagccaattacttcgtgct
atggagacatctggcatgtttacagaaatgttgtcagcaaatgaaattgatgtggaaagc
ttgagtgctgataatgcaatcagttttgcatcaaaactgcagctattaggcagtaatagt
gatggcagtgaatctttgagtaggcaaatgcttgatgatatagaatcgataaaacaacga
atgttaacaacttctggatatttaaaatgtgttcagagtaatttgcatgttactgtctcc
gcgttagttgcagctgcagttgtctggatgtcagagcttcctgctcgactaaatccaatt
attttacctttgatggcttcaatcaaaagagagcaggaagaaaaattgcaggagaaggct
gctgaggcacttgcagaacttattgctgattgtatagctcgtaaacctagtccaaatgat
aaattaatcaagaatatttgtagtttgacaagtatggatccttgtgagacacctcaagct
gcagctatgggttccatggagataattgatgatcaagattttctctcctttgggagcagt
acaggaaaacagaagtcaagggctcacatgcttgctggtggtgaagatcggtcaagagtt
gaaggctttattagcagaagagggtctgagcttgcattgaggcatttgtgtgggaagttt
ggtgtttcattatttgataagctgccaaaactctgggactgccttactgaagttcttatt
ccagatggtccttcaaataaaaagaaaataatattagccatcgagtctgttagggatcca
cagatcttaataaataatatccagcttgtacgttccattgcaccaatgctagatgaggca
ttaaaaccaaagctgcttacacttcttccatgcattttcaaatgtgtttgtcattctcat
gtctctgttagattggctgcttcccgatgtatcacgtcaatggctaaatcaatgaccata
aatgtaatggcagctgtagtagaaaatgcaattccaatgttaggggatatgacctctgtt
catgccagacaaggtgccggcatgcttattagtttgcttgttcagggattgggtgcggag
cttgtaccatacgctcctttgttagttgttcctcttctgaggtgtatgagtgattgtgat
cagtctgttagacagagtgtgacacgaagttttgcatctcttgtaccactacttccatta
gcaaggggtgtttcaccacctactggactgactgaaggcttatctagaaatgcagaagat
gcacagttcttggagcagttacttgacaattcccatatcgatgactacaaacttggcact
gaattaaaagtaaccttgaggaggtaccaacaggaaggtataaactggttggcatttctg
aaacgtttcaagcttcatggaatcttatgtgatgatatggggctgggaaagacactccaa
gcttcggcgattgtagcatctgacattgcagagcggcgtgcttcaaacagtattgaggag
attcatccatctttaattatttgcccctcaacacttgttggacactgggcatttgaaata
gagaagttcattgatgtttctttaatgagtactctccaatatgttggttcagcccaagat
cgcattgctcttagagaacaatttgataagcataatgtcatcattacatcatatgatgtg
gtccgtaaagatgccgattatcttggacaattactttggaattactgtattcttgacgaa
gggcatatcatcaagaactccaagtctaaaattacagttgcagtaaagcagctgaaagca
gcacaccgactaatacttagtggaacacccattcagaataacatcacagatttgtggtcc
ctttttgattttctaatgccagggtttcttggaacagagagacaattccaagctacttat
gggaagccactggtggcggctagagattctaaatgttctgccaaagatgctgaagctggg
gtacttgccatggaagcattgcataagcaggtcatgccgttcctactccgtcggacaaaa
gatgaagttctttctgaccttccagaaaagataattcaggacagatactgtgatctgagt
gctgtccaattaaaactttatgaaaagttttctggttcacaagcaaaacaagaaatttct
ggcatggtaaaagttgatgagtctgcagataaaggagaagggaataatgtctcagcaaaa
gcatctacgcatgttttccaggcactgcagtacttgctaaaactttgtagtcatccattg
cttgtccttggggacaagattcctgaatcacttttatgccatttgtcagaactctttcca
ggaagttctgacatcatttctgaactacataagcttcatcactctcccaaattagttgct
cttcaggagataatggatgagtgtggaataggcgtggatggttctagttctgaaaatgct
gttaatgttgggcagcacagaattttgatatttgctcagcataaagcctttctagacatt
attgaaagagatttgtttcagacccatatgaagagtgtaacctacctacggctagatgga
tcggttgaatcagaaagacgttttgatatagtgaaggcttttaattcagaccctactatt
gatgcactgcttcttacgacgcatgttggtggcctgggattgaacctgacatctgctgac
acccttgttttcatggagcatgactggaatcctatgcgggaccatcaggcaatggacaga
gcacacagattagggcagaaaaaggtcgtacatgtccatcgtctcattatgcgcggcaca
ctggaagagaaagttatgagcctccaacggtttaaagtttctattgcaaataccgtaatt
aatgcagagaatgccagcatgaaaacgatgaatactggccagttgcttgatttattcgct
tctgcggaaacgcctaaaaagggtggcggggtatcaaagctctctgatgttgatggagat
ccaaaattaatgggcacgggaaagggattgaaggccattcttggtggactggaagagcta
tgggatcaatcacagtacaccgaagaatacaacttgagccagtttttagcaaagctcaac
agctga
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