Citrus x clementina (clementine): CICLE_v10030493mg
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Entry
CICLE_v10030493mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10030493mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CICLE_v10030493mg
Surveillance factors
Other surveillance factors
CICLE_v10030493mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
18044824
NCBI-ProteinID:
XP_006437968
UniProt:
V4STQ1
LinkDB
All DBs
Position
Unknown
AA seq
1573 aa
AA seq
DB search
MAEGKFDLPDDLLPSKPSDHPWTPKGDASGRNEDKVHLGSLDVTKDQLVSESSIPLSPQW
LYAKPSESKDVRGPTSVSLGSSSDPNQKESWRVEGSEEKKDWRRSAADGEISRRWREEER
ETGLLGGRRDRRKTDRRVDNVLARDSIDSRTLPSSDRWHDNPRRDSKWSSRWGPEDKEKE
SRNEKRIDVEKDKDDAHTDSQSFVSSNRSASERDPDTRDKWRPRHRMEVHSGGSTSYRAA
PGFGIERGRVESSNLGFTMGRGRSNVIGRGTSAGPIGALQSESIPGKPTLSADTFCYPRA
KLLDIYRRQKNDPSFTTMPDGMEELSPLTHAHVIKPMAFVTPDPEEEVVLSDVWQGKITS
SGVVYNSFRQGRSTDYVSGSEGLESTEIKQKVLPDEIVDTFQEAGNFDACQEPIHEEHKI
TTKNLGLESNGKALTLAKSNGVRTAKDFDASSHNIGEDWQMLDSAFNKYHQFENTESAAS
FDIRPKLHDESSSLLVTASSEQKQGTDAPQLGSNVTMKELERAAPPEQLVLYYIDPQGAT
QGPFLGADIISWFEQGFFGIDLPVRLADAPEGTPFQDLVEVMPHLKAKDMNVSTSDPNSE
LELGAFGGSMEASLPTASAVNNGMSQPFSEFNGISAQNIQTRLSEPEAPLQLPRSEGQSI
QDLLAQDEEILFPGRPGNAGYPIVKSSGSFHEPVVQPSQPMDLTESGMQNQNDNRMHPIG
LLWSELEATQTRPTSVPSSAGRATPFSAMADPALAADTWSDIYRKNTLADPNVYQDPMAA
HHMRHVEQESNNFDLAEQLLSKQLQQQQLQQRNMFSSHAHLNESVLEQVPNQNVIHQQQL
ANHPAADLEHLLTLHLQQQQQQQQLQLQHHQMQQQQQLHQQKLLLERQQSQARQVLLEQL
LHNQMPDPGLGQSHIDPIRANNALDQALLEQHLLHELQQRSHHPQKHFVPSLDQLIQMKF
GQAIQQEHHRDLMELMSRSPHGQMQALEHQILLQEQMRARQLSMGLRQRANVPADRHIDP
LWQVDESDQLLRTHSGAHSSGFSPLDVYQQQQRPPHEEQLVNLERNLSLQEQLRQGIFEP
GSLPFERSISLPAGAPRMNLDTANAMSHPHGLDLQVLNPHMQPAGQVGSFNSGIHPHNHH
HPLVPNQPNISHLDAIDCHWSESNGQLANEWMESRIQQLHINAEQQRREPEVKMTSENPS
LWMSDGSHDEKSRQLLMELLHKKSGHQPSESLDMNMNGVSLGRRSPSGVYSGSTSSDHPF
SMLSDREAGPNSSFAVGSYGSNSSEPQQAYVADKQAGSLESNEKLRLRSESGVFSEAELL
FRNINESAQSVYKESNMIHQSFLTKELSELEGRKRGSKSEDMTKGSVFEVQDGIAKQAGL
AALDRVDTLGRHTSEAASSEAGFYDSFAEDFVKNQSAVASRRIQDSVLLRRPSVSRTLSS
QEGLHDVNSNPVIRGKHSSSSADGSQDPGGNSVSQVSDMASGKKEISFRRTSSCSDSDSS
EPLFIDMLKSNTKKNFMPETHTTVGMTDSTDGMQGGRGGKKKGKKGRQIDPALLGFKVTS
NRIMMGEIQRLDD
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggcaagttcgatctacctgacgatctcctcccatctaaaccgtccgatcat
ccgtggacgcccaaaggggatgcttcggggagaaatgaggataaggttcatctggggtca
cttgacgtgacaaaagatcaattagtatctgagagcagcataccgttatctccccagtgg
ctttatgccaaaccaagtgagagtaaggatgtgcgtggtcccacttctgtttctcttgga
agctccagtgatcccaaccagaaggagagttggcgtgtcgaaggttctgaggaaaaaaaa
gattggaggaggagtgctgctgatggtgaaattagccgccgctggcgcgaagaggaaaga
gaaactggcttgcttggtggtagacgagatcgcaggaaaacagatcgtcgtgttgacaat
gttctagcaagagactcaattgacagcagaactttaccttcttctgatcggtggcatgat
aacccacgccgtgatagcaagtggtcttctaggtggggtcctgaagacaaagagaaggaa
tcccgaaatgagaagaggatagatgtcgagaaggacaaggacgatgctcacactgacagt
cagtcttttgtaagtagcaaccggtcagcttctgagcgtgatccagatactcgtgataaa
tggagaccacgccacagaatggaggttcattctggtggttcgacttcctaccgtgctgcg
cctggatttggaattgagagagggcgggtagagagttcaaatttgggatttaccatggga
cgaggaaggtccaatgttattgggagggggacatctgcaggtcccattggtgctttgcaa
agtgaaagcatccctgggaaacctaccctctcagctgatactttttgctatccaagggca
aagcttcttgacatctatcgtaggcagaaaaatgatccctcttttactactatgcctgat
gggatggaggagttgtcccctttaacccatgcacatgttattaaaccaatggcttttgtt
actcctgatcctgaagaggaggttgtccttagtgatgtatggcagggaaagattaccagt
agcggggtggtatacaattcatttagacagggaagatcaactgattatgtctcaggttct
gaaggcttggaatccactgagataaaacagaaggttctccccgatgaaattgtagacacc
ttccaagaagctggaaactttgatgcatgtcaggagcctattcatgaagaacataaaatt
acaacaaagaaccttggattggaatcgaatggaaaagccttaactcttgcaaaaagcaat
ggtgtcagaactgccaaagattttgatgcttctagtcataatattggggaggattggcaa
atgctggattctgcttttaataaatatcatcagtttgaaaacactgagtctgctgcttca
tttgacatcaggcccaagcttcatgatgaatcaagctctctgttggttacagcctcttct
gagcaaaaacaaggtactgatgcaccgcagttggggagcaatgtaactatgaaagaatta
gaaagggctgccccacctgaacaactagttctgtactacatcgatcctcaaggggcaact
cagggaccatttcttggtgctgatatcatttcatggtttgagcaaggcttttttgggatt
gacttgccagtccgcctggcagatgctcctgaaggaactccattccaagatttggttgag
gtgatgccacatcttaaagctaaggacatgaatgtcagtactagtgatccaaattctgag
ctggagcttggtgcttttggaggaagtatggaggctagtttacctactgcttcagctgtt
aataatggcatgtcccagccattttccgaatttaatggcatctcagctcagaatattcag
acaaggttgtcagagcctgaagctcctttgcagctgcctcgttctgaggggcaaagcatt
caagatcttttggcacaagatgaagaaattttgtttcctggaagacctggaaatgctggc
tatcccattgtaaaatcttccgggagctttcacgagcctgttgtccagccctctcaacca
atggatttgacagaatctggcatgcaaaatcagaacgataataggatgcaccctatcggc
ttgttgtggtctgagcttgaagcaactcaaacaaggcctaccagtgtgccttccagcgct
ggaagagctaccccgttcagtgctatggctgatccagcacttgctgctgacacatggtca
gatatttacaggaaaaatacacttgctgaccctaatgtgtatcaagatcccatggctgct
caccatatgcgacatgtggaacaggaatccaacaatttcgatctagcagagcagcttttg
tcaaaacaattgcagcaacagcagctccaacagcggaatatgttttcttctcatgcacat
ttgaatgaatcagttctagaacaagtgccaaatcagaatgtgattcatcaacaacagttg
gcaaaccatccagcagcagatttggaacatcttctgacacttcatctgcaacagcaacag
cagcagcagcaacttcagcttcagcatcatcaaatgcagcagcagcagcagttgcatcaa
caaaagcttttgttggagcgacagcaatctcaagctcgacaggtacttctcgagcagttg
ctgcataatcaaatgcctgatcctggccttggacagtcgcatattgatcctatcagggca
aataatgctcttgatcaggctttactagagcagcaccttctacatgagctgcaacaacgg
tctcatcatcctcaaaaacattttgttccatctttggatcagctcattcaaatgaagttc
ggtcaggcaatacaacaagagcatcatagagatttaatggaactaatgtcacgttcacca
catggacaaatgcaagctttggagcatcagattctccttcaggagcagatgcgggcaaga
caattatcaatgggattaagacagcgagccaatgtgccggcagatagacatattgatcct
ctttggcaggttgatgaatctgatcagttgcttcgtactcattctggtgctcactcctca
ggatttagcccactagatgtttaccagcagcaacagaggccgcctcacgaggagcagctg
gttaaccttgaacgaaatctttcgttgcaagagcaactcagacaagggatttttgagccc
ggttcactgccatttgagcggtccatatctttgcctgctggcgcgccgaggatgaatctg
gatactgctaatgctatgtcgcatcctcatggtctggatttacaggtgttgaacccccat
atgcaacctgctgggcaagtgggttcttttaattctggcatccatccccacaatcatcat
caccctttagttcccaaccagcccaatatttcacacttggatgcaatagattgtcactgg
tctgagagcaatgggcagctagcaaatgagtggatggaatctaggattcagcagttacat
attaatgctgagcagcagagaagggagccggaagttaaaatgacttctgaaaatccaagt
ttatggatgtcagatggatctcatgatgagaagtcaaggcaattgttgatggaattactc
cataaaaaatcaggtcatcaaccttctgagtcattggacatgaatatgaatggagtatcc
cttgggaggaggtcaccatctggtgtctactctggatcaacctcttccgatcacccattc
agtatgctttcagaccgagaagcaggtccaaacagctcatttgctgtaggatcttatggt
tctaattcatctgaaccacagcaggcttatgtagctgacaagcaggctggcagtcttgaa
agcaatgaaaaattacgactaagatctgaatctggagttttttctgaggcagaattgctc
tttcgaaacatcaatgagagtgctcagtcagtttataaagaatctaacatgatccatcag
tcattcctgaccaaagagttatctgagttggaggggaggaagcgtgggtcaaaaagtgaa
gatatgacaaagggttcggtttttgaggtacaggatggcatagcaaagcaagcagggttg
gctgctttagatcgggtggatacacttggcagacatacttcagaagctgccagtagtgaa
gctggtttctacgattcatttgcagaagattttgtgaagaatcagtcagcagttgcatcc
aggaggattcaagacagtgtcttgctgagacgcccatctgtctcacggactttgtcatct
caagaaggattgcatgatgtgaactctaatccagttatcagggggaaacattcttcaagt
tctgctgatggtagccaagatccagggggtaattcagtgagccaagtttcggacatggca
tctggaaagaaagaaataagcttccggcgtacctcatcatgcagtgattctgattcgtcg
gagccattgttcatagacatgttgaagagcaataccaagaagaatttcatgccagagact
cacacaactgtggggatgacagactcaacagatggaatgcagggtggccggggtggcaaa
aagaaaggaaagaaaggaaggcaaattgatcctgctctccttggttttaaagtcacaagc
aatcggataatgatgggtgaaatacagcgactagatgattag
DBGET
integrated database retrieval system