Citrus x clementina (clementine): CICLE_v10030507mg
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Entry
CICLE_v10030507mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10030507mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
CICLE_v10030507mg
REST complex
CICLE_v10030507mg
Heterochromatin formation proteins
Other heterochromatin formation proteins
CICLE_v10030507mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
18043714
NCBI-ProteinID:
XP_006438513
UniProt:
V4TJI4
LinkDB
All DBs
Position
Unknown
AA seq
1424 aa
AA seq
DB search
MKRSRDEVYMNSQIKRPMISSRGEPSGQTQVVGGGGGGGAQKLTTNDALAYLKAVKDIFQ
DKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPLED
EQPPPKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVEALF
QDHPDLLEEFTHFLPDSSGAASIHYVPSGRNSILRDRSSAMPTARQVHVDKKERAMASHA
DRDLSVDRPDPDHDRVLLKSDKDQRRRGEKERERRDDHRRERERDDRDFENDVNRDFSMQ
RFPHKRKSARKIEDSTAEPLHQGMFSQELSFCEKVKDKLRDDYQEFLRCLHLYTKEIITR
SELQSLVGDLLGRYPDLMDGFNGFLARCEKSEELLADVMSKKSLWNEGRIPKSVKVEDRD
RDRDRERDDGVKDRDREAREKDRLDKSVAFVNKDVGPKMSMYSSKDKYLAKPIQELDLSN
CERCTPSYRLLPKNYLIPSASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLF
RCEDDRFELDMLLESVNVTTKRVEELLEKINNNTIKTDGPIRVEDHFTALNLRCIERLYG
DHGLDVMDVLRKNASLALPVILTRLKQKQEEWARCRSDFNKVWAEIYSKNYHKSLDHRSF
YFKQQDSKSLGAKALSAEIKEISEKKRKEDDVLLAIAAGNRRSIVPHLEFEYSDPDIHED
LYQLIKYSCGEMCTTEQLDKVMKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKSHTVKSRA
ASVGDSDGSPDGDAAAMTSKHSNPSRNGDESIPPEQSSSSRAWLPNGDHGIKEDVSVEAD
HNARKSDNFCDSSEQDKVQNNAAMADETSGISKQASTNERLIGTNAAIAAAADQSNGRSN
IENTSGLSVAHSRPGNHIVEGGLELRSSNEILPSSEGGDCSRQNISTNGVMTEGAKILRY
NAESVKQFKIEREEGELSPNGDFEEDNFAVYGESGLEAVHKAKDGAVSRQYQTRHGEEVC
CGEAGGENDADADDEGEESAHRSSEDTENASENGDVSGSESGDGEGSSREEHEEDGDQDE
HDNKAESEGEAEGMADAHDVEGDGTSLPFSERFLLSVKPLAKHVSPSLHDKEKGSRVFYG
NDSFYVLFRLHQTLYERIQSAKINSSSAERKWKTSNDSSPTDLYARFMNALYNLLDGSSD
NTKFEDDCRAIIGTQSYVLFTLDKLLYKLVKHLQAVAPDEMDNKLLQLYAYEKSRKPGRF
VDVVYHENARVLLHDENIYRIECSSIPTRLSIQLMDNGHDKPEVTAVSMDPNFAAYLYHD
FLSVPDKKEKPGIFLKRNKRKFVGNDEFSATCRAMEGLQVVNGLECKITCNSSKVSYVLD
TEDFLFRKKKRTFHQNGPCHNQARASNGYPIRRLQRFQRWLSGS
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtccagagacgaggtttacatgaactctcaaattaaacggccgatgatttct
tcacgaggagaaccctctgggcagacccaagtggtgggaggaggaggaggaggaggtgca
cagaagttaacaacaaatgatgccctagcatatctcaaggctgttaaggacatatttcaa
gacaaaagggagaaatacgatgactttcttgaagttatgaaagacttcaaagctcaaaga
attgacacagcaggtgtcatagcgagggtaaaggagctgtttaaagggcatagagaccta
attttgggtttcaataccttcctgccaaagggatatgagatcacacttccacttgaggat
gagcagcctccacctaagaagcctgttgaatttgaagaagctattaattttgtaaacaag
attaagacaagatttcaaggtgatgatcatgtttataaatcatttttagacattttgaac
atgtacagaaaggaaaacaagtccatcacggaagtctaccaggaggttgaagcacttttc
caagatcatccagatctgcttgaggagtttacacattttctgccagattcttcaggagca
gcatcaattcattatgttccatctggaaggaattctatactccgggataggagctcggcc
atgcccacagcgcggcaagtgcatgttgacaagaaagaaagggctatggcttcacatgct
gaccgggacctcagtgtggaccgtcctgatcccgatcatgatagggtcctgctgaagtca
gacaaagaccaaaggaggcgtggggaaaaagaaagggaaaggagagacgaccatagaaga
gaacgagaacgagatgatagagattttgagaatgatgtaaatagagacttcagcatgcaa
cggtttccccacaagagaaaatctgctcgtaaaattgaagactcaactgctgaaccgttg
catcaaggtatgttcagccaggagctctctttctgtgagaaagtcaaggataagttacgt
gatgattaccaggagtttctgaggtgccttcatctctataccaaggaaattatcacacga
tcagagttgcaatctttggtgggcgacttgcttgggagatatccagatctaatggatggg
ttcaatggatttttggcacgttgcgagaaaagtgaggaattacttgctgatgttatgagc
aaaaaatcattgtggaatgaaggacgtatacccaaatctgttaaggtagaggacagggat
agagatcgagatcgtgaaagagatgacggggttaaggatagggaccgcgaggcccgagaa
aaagatagacttgacaaaagtgtagcctttgtcaacaaagatgtaggtccaaagatgtct
atgtactccagcaaggataagtatcttgcaaaacccattcaagaacttgacctctctaac
tgtgagcgctgcactcccagttatcgactactgccaaaaaactatctaattccttcagca
agccagagaacagagcttggtgctgaagtactgaatgatcattgggtatctgtcacttca
ggaagtgaagattactctttcaaacacatgcgcaagaaccagtatgaagaaagcctgttt
cgatgcgaagatgacaggtttgagctggatatgttgttagagtctgttaatgtaactacc
aaacgtgtggaagaactgttagaaaagattaataataatacaatcaaaacagatggccct
attcgtgttgaagatcacttcacagctctaaatctaaggtgtattgagcggttgtatggt
gatcacggacttgatgtgatggacgtattgcggaagaatgcttctctagctctgccagtt
atattgacacgattgaagcagaaacaagaagagtgggccagatgccgttctgattttaac
aaagtttgggctgaaatttactccaagaattatcataaatctcttgatcatcgtagcttc
tatttcaaacagcaggactcaaagagcttgggtgcaaaagcattgtcggcggagatcaaa
gaaatcagtgagaagaagcgcaaggaagatgacgtgcttcttgccattgctgctggaaac
aggcggtctattgttccacatttggaatttgagtattcagatcctgacatccatgaagat
ttgtatcagcttattaaatattcatgtggggaaatgtgtacaactgaacagttggacaaa
gtaatgaagatttggacaaccttcttggaaccaatgcttggagttccttctcgacctcag
ggtgcagaggacactgaagatgttgtaaaggccaagagtcatactgtcaaaagtcgtgct
gctagtgttggagatagcgatggcagtcctgatggtgatgctgctgccatgacttccaaa
cattcaaatccttcccgaaatggagatgaaagtattcctccggagcagtcaagttcttct
agggcatggttgccaaatggagatcatggaataaaagaagacgtttctgtggaggcagac
cataacgctcgtaagagtgataatttctgtgatagttctgagcaagacaaagtgcagaat
aatgcagctatggctgatgagacttcggggatcagcaaacaggctagtaccaatgaacga
ttgatcggtacaaatgctgcaattgctgctgcagcagatcaaagcaatggaagaagtaac
atagaaaatacttcagggcttagtgtggcacattctagacctggtaatcacattgttgag
ggtgggcttgagttgaggtccagtaatgaaattctaccttcttcagagggtggagactgc
tcgaggcagaatatatccacaaatggggtgatgacagaaggagccaagattctcagatat
aatgcagagtctgtcaagcaattcaaaattgaaagagaagagggtgaattatctccaaat
ggagatttcgaggaggataattttgcagtttatggagaatctggtttggaggctgtgcat
aaagcaaaggacggtgctgttagcagacaatatcaaaccagacatggagaagaagtatgc
tgtggggaggctggtggagaaaatgatgctgatgctgatgatgaaggtgaggagagcgct
cacaggtcttcagaggacaccgagaatgcttctgagaatggtgatgtatctggaagtgag
tctggtgatggcgagggtagctctcgggaagagcatgaggaagatggagaccaggatgag
catgataacaaggcagagagtgaaggagaagctgaagggatggctgatgctcatgatgtt
gaaggagatggaacatcattgccattttcagaacgttttctactatctgtgaagcctcta
gcaaagcatgtctccccatcgctacatgacaaggagaaaggctctagagttttctatggc
aatgattccttctatgtgctttttaggcttcaccaaacattgtatgagagaatacaatca
gcaaagattaattcatcatctgcagagaggaaatggaagacttcaaatgattcaagccct
actgatctatatgccaggttcatgaatgcactttacaatttacttgatggttcttctgat
aatacaaaatttgaggatgattgccgagctattattggcactcaatcctatgttttattt
acattggacaagctgctatataaacttgtcaaacatctccaagcagttgcacctgatgag
atggacaacaagcttctccaactatatgcatatgagaaatcgagaaagcctggaagattt
gttgatgtagtttatcatgaaaatgctcgcgttctacttcatgatgagaatatatatcgt
attgaatgttcatccatacccacccgcctatctattcagcttatggacaatggacacgat
aagcctgaagtgacagctgtttccatggatcctaattttgcagcgtacctgtaccatgac
ttcctttcagttcctgacaagaaagagaagcctggaatattcttgaagaggaataaacgc
aaatttgtaggcaatgatgagttttcggcaacatgccgggccatggaagggcttcaagtt
gtcaatggtttggagtgtaagataacttgcaattcatccaaggtctcatatgttttggat
actgaagattttttgtttcgtaaaaagaaaagaactttccatcagaatggcccgtgccac
aaccaggcaagggcttcaaatggttatccaattagaagattacaacggtttcaaagatgg
ctttctggctcgtaa
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