Citrus x clementina (clementine): CICLE_v10030509mg
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Entry
CICLE_v10030509mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10779
transcriptional regulator ATRX
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cic03000
]
CICLE_v10030509mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10030509mg
Transcription factors [BR:
cic03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
CICLE_v10030509mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
CICLE_v10030509mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
CTD2
PLAC9
Motif
Other DBs
NCBI-GeneID:
18044053
NCBI-ProteinID:
XP_006437466
UniProt:
V4TLN7
LinkDB
All DBs
Position
Unknown
AA seq
1444 aa
AA seq
DB search
MEDKHSEDEKHEEVEDIESDSGDSFIVDSESDEPSISGQDDGLHLEEHLTEEEIEELIAE
FLEVESKAAEAQEALELESLVKLKNEVREELAQALHGDDLEAAVEDEMTVYKEQWEAALD
ELETESAHLLEQLDGAGIELPSLYRLIENQVPNGCCTEAWKRRAHWVGSQVTSEMRESIA
GAEDFLQTERPVRRRHGKLLEEGASGFLQKKIANDGSENGGKEVSDINWNSVNKIFSGDV
SEKCAAFGSKHWASVYLASTPQQAAAMGLKFPGVDEVEEIEDVDGNSDDPFVADAIANEK
ELALSEEQRKKFRKVKEEDDANMDRKLQLHLKRRRHQKRSKQKTDDGDMPGNNNEVALQN
LETGVLESSVKERSLSNGISSVSDSALPDSSELRGIKRSNESEEPNSEKKRSRTIIIGSD
EADVVKDECSTKLEDHSVSPENINDAATDNSLHSQSLSEKFYCTACNNVAIEVHPHPILN
VIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLVSCKSCKTLFCTTCVKRNISEACL
SDEVQASCWQCCCCSPSLLKRLTSELGRAMGSENLIVSSSESDSENSDADNNLKIGGKRK
QKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGAS
IEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGD
KGLGCILAHTMGLGKTFQVIAFLYTAMRSVDLGLRTALIVTPVNVLHNWKQEFMKWRPSE
LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHAL
QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF
LGSSHDFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF
VITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDK
GYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHDHTYKEL
DYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY
RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD
LQAIYRAWRYGQRKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEM
LHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLMESLLGKHHPR
WISNYHEHETLLQENEEERLSKEEQDMAWEVFRKSLEWEEVQRVTVDESISERKPASMSN
LTPAPETSSVTQPRGILRSHVVIRKCTNLSHKLTLRSQGTKPGCSTVCGECAQEISWENC
KVAR
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaacactcggaagatgaaaaacatgaggaagtggaagatattgagagtgat
tctggtgactcttttattgtagattcagaaagtgatgagccgtcaatatctggacaggat
gatggattgcatcttgaggaacatttgaccgaggaggaaatagaagagctaattgcagag
ttcttggaagttgagagcaaggctgcagaggctcaggaggctcttgaacttgagtccctt
gtcaaactgaagaatgaggtgagagaagagttggcacaagcactgcatggagatgatttg
gaggctgctgttgaagatgaaatgactgtttataaagaacagtgggaagctgcactggat
gaacttgagactgagagtgcgcacttgttggaacaactcgatggagctggtattgaatta
ccaagcctttataggttgattgagaaccaggttcctaatggttgttgcactgaagcttgg
aaaagaagagcacactgggtaggatctcaggtgacaagtgaaatgagggagtcaatagct
ggtgccgaggattttcttcaaaccgaaaggcctgtaagaaggcgacatggaaaacttttg
gaggagggtgctagtggattcctccagaaaaaaattgctaatgatgggagcgagaatggt
ggaaaagaagtttcagacatcaactggaactcagttaacaaaatattttctggtgatgtt
tctgagaaatgtgctgcatttggcagcaagcattgggcttctgtttacttagctagtact
ccacagcaagctgcagcaatgggactgaaatttcccggtgttgatgaggttgaagagatt
gaagatgttgatggaaattctgatgatccgtttgttgcagatgcaatagcaaatgaaaaa
gagctggctctttctgaagagcaaaggaaaaaatttagaaaggtgaaagaggaagatgat
gcaaatatggatcgcaagcttcagcttcatttgaaacgaaggaggcatcaaaaaagatct
aaacagaaaactgatgatggtgatatgcctggcaataacaatgaggttgcattgcaaaat
ttggaaactggtgtgcttgaaagttccgtcaaggaaaggtcactgagtaatggcatttct
tcagtctcagattctgctttgcctgattccagtgaacttagaggtataaagcgttccaat
gaaagtgaggagccaaacagtgagaaaaagaggagtcggactattattataggtagtgat
gaagcggatgtggtgaaggatgaatgttccaccaaattggaagatcattctgtctcacct
gaaaatatcaatgatgctgccaccgataattcccttcattctcagagtttgagtgagaag
ttttactgcactgcctgtaataatgtggctattgaagtgcacccccatccaattcttaat
gtaattgtttgcaaggattgcaaatgcctactggagaagaagatgcatgtgaaggatgcc
gactgctctgagtgttactgtgtatggtgtgggcgaagcagtgatttagtgagttgtaaa
tcgtgtaaaacgttattctgtaccacttgtgtgaagaggaatatcagtgaagcatgcttg
tctgatgaagttcaggcctcttgctggcaatgttgttgctgctctccaagtcttttgaaa
agattgacatcagaattggggagagccatgggatctgaaaacctgatagtttctagctct
gaaagtgattcagagaattcagatgctgacaacaatctcaaaattggcggcaagagaaag
cagaaaaagaaaattcgaaggattctggatgatgctgaattaggagaagagaccaaaagg
aaaattgcaatagagaaagaacgacaagaacgtctgaagtcattgcaagtacagttttct
agcaaatctaagctgatgaactctgtgacattggatggagacttgtcagctggtgctagc
attgaagtgcttggtgatgccattaccggttatatagtgaatgttgtcagggagaaaggt
gaagaagcagtgaggatcccatcaagcatatcggctaaattgaaagctcaccaggtggta
gggataagatttatgtgggaaaatatcatacagtcaatcagaaaagtgaaatctggagat
aaagggcttggttgcattctagctcatacaatgggtcttggtaaaacttttcaggtcata
gcttttttgtatacagcaatgagaagcgtcgatttgggattaagaactgctcttattgtc
acacctgtaaatgtgcttcataattggaagcaggagtttatgaaatggaggccatcggaa
ttgaagcctctccgtgtcttcatgctagaagatgtatcaagggatagacgagcagaattg
cttgcaaagtggagagctaagggtggtgtttttctgattggttatactgctttccggaac
ttgtcttttggaaagcatgtgaaggatcgaaacatggctagagaaatttgtcatgccttg
caggatggacctgatatacttgtttgtgatgaagcacacatgattaaaaacactagggct
gatacaacccaagccttgaaacaagtgaaatgccaaagaaggattgcattgactggatca
cctcttcaaaacaatctcatggaatattattgtatggttgatttcgtacgggaaggtttt
cttggtagcagccatgacttccaaaatcctattgaaaatggtcaacatactaattcaaca
tctgaggatgttaaaattatgaatcaaaggtctcacatcctctatgaacaattaaaagga
tttgtccagagaatggacatgaatgtggtgaagaaggacttgccgccaaaaactgtcttt
gtaataactgtgaagctctctcctctacagaggagattatacaagagattccttgatttg
catgggttcacaaatgacagagtttccaatgaaaagatacgaaagagttttttcgctggg
taccaggctttggctcagatatggaaccatcctgggatcttgcagttgacaaaagataaa
gggtatccaagtcgtgaggatgctgaggacagctccagtgatgaaaacatggattataat
gtggtgataggagagaagccgcgaaacatgaatgattttctgcagggaaagaacgacgat
ggctttttccaaaaggattggtggaatgatcttctccatgatcatacctataaagagctc
gactacagtggcaaaatggtcttgctgctggacattctaaccatgtgttctaatatgggc
gataagtcattggtttttagccaaagcataccaactttagacctcatagagttttatctt
tcaaaattacctcggcctgggaaacaagggaagttgtggaaaaaaggaaaggactggtac
agactagatggaagaacagagagctctgaaaggcaaaagttggtggagaggtttaatgag
cccctaaataaaagggtgaaatgtactctgatttcaaccagagctggatctctggggata
aatcttcattctgctaaccgtgtaattattgttgatggttcttggaatccaacatatgat
cttcaggccatatatcgtgcttggaggtatggacaaagaaagccagtttttgcttaccgg
ttgatggctcatggaaccatggaagagaagatatataagcgtcaggtgacaaaggaaggg
cttgctgcaagggtggtggatagacaacaagtccataggactatatcaaaagaagaaatg
ttacatctctttgaatttggtgatgatgaaaatcctgatcctttgacagcagtcagtaaa
gagaatggacaaggaagtagtcaaaatacaaattgtgcactgaagcataagttgcctctt
tcgcatgaaggttgttctgacaaattgatggaaagcttacttggcaagcatcacccaagg
tggatttccaattatcatgaacatgagacccttttgcaagagaatgaagaagaaaggctt
tcgaaggaggagcaagacatggcttgggaagtattccggaaatcattagaatgggaggaa
gtacagcgagttacagtggatgaatccatatcagagcgtaagcctgcttccatgtcaaac
ttgactcctgctccagagaccagcagtgtcacacaacccaggggcatattgaggagtcat
gtggtaattcggaaatgcactaatctatctcataagctgactcttagaagtcagggcaca
aaacctggttgtagtactgtatgtggagaatgtgcccaggagatttcctgggagaactgc
aaagtcgctagatga
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integrated database retrieval system
