Citrus x clementina (clementine): CICLE_v10030551mg
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Entry
CICLE_v10030551mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10030551mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CICLE_v10030551mg
Spliceosome [BR:
cic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CICLE_v10030551mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_ISE2
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
Ski2_cyano_M
Motif
Other DBs
NCBI-GeneID:
18043713
NCBI-ProteinID:
XP_006438512
UniProt:
V4TEM8
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYTRSILSGSTTFPVFANTKPFSFHQFHTLSHTLGFCIPKPLLSSNSIQFQASYKSPKSF
FPTEHKLTDADEAGDEYDDDIDDDDDEEAADEYDDVSGEVSDGIQQSDDEFEVSSDSSPA
PSWREEFKWQRVEKLCNEVKEFGNEMIDVDELASIYDFRIDKFQRSSIEAFFRGSSVVVS
APTSSGKTLIAEAAAVATVAKQRRLFYTTPLKALSNQKFREFRETFGDNNVGLLTGDSAI
NREAQILIMTTEILRNMLYQSVGMVSSESGLFDVDVIVLDEVHYLSDISRGTVWEEIIIY
CPKEVQIICLSATVANADELAGWIGQIHGKTELITSSRRPVPLTWYFSTKTALLPLLDEK
GKHMNRKLSLNYLQLSTSEVKPYKDGGSRRRNSRKHTDMNSNNIVTSFGQHQLSKNSINA
IRRSQVPQVIDTLWHLRSRDMLPAIWFIFNRRGCDAAIQYLEDCNLLDECEMSEVELALK
RFRILYPDAVREPAIKGLLKGVAAHHAGCLPIWKSFIEELFQRGLVKVVFATETLAAGIN
MPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRGHVVLVQTPYEGAEECCK
LLFAGVEPLVSQFTASYGMVLNLLAGAKVMHLSNESDDMKALQAGRSLEEARKLVEQSFG
NYVGSNVMLAAKDELCKIQKEIDVLTSEISDDAIDRKSRRLLSEAAYKEMANLQEELKAE
KRFRTELRRRMELKRFSALKDILKDFENGHLPFLCLQYKDSEGVEHSVPAVYLGKFDSLD
SSKLKNMASINDSFALNRLAQSNGDDYDTQDVKPSYYVALGSDNTWYTFTEKWIKTVYRI
GFPNVALAQGDALPRETMSLLLDKGEMLWEKLADSEFGGLWCMEGSLETWSWSLNVPVLS
SLSESDEVLHMSFEYHDAVENYKKQRTKVARLKKTIARTEGFKEYKKIVDTVKFTEEKIK
RLKARSKRLTKRIEQIEPSGWKEFLRISNVIHETRALDINTQVIFPLGETAAAIRGENEL
WLAMVLRNKILLDLKPAQLAAVCASLVSEGIKVRLWKNNSYIYEPSTTVINVINVLDEHR
SSFLELQEKHGVEIPCCLDSQFSGMVEAWASGLTWREMMMDCALDDGDLARLLRRTIDLL
AQIPKLPDVDQRLQKNAVDASNVMDRPPISELAG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacacacgctctatcctctcgggttcaaccacattcccagtcttcgccaatacgaaa
ccgttctcatttcatcagtttcacactctctcgcatacccttggcttttgcatacccaaa
ccacttctatcatctaattcaattcaatttcaagcctcctacaagtctcctaaatcattc
ttccccacggagcacaagctcaccgacgccgacgaagcaggagatgagtacgacgatgat
atagacgacgacgacgatgaagaagccgccgacgagtacgacgacgtttctggcgaggtc
tcggatggaattcaacaaagtgatgacgaattcgaagtttcttcggattcgtccccggcg
ccgtcttggcgcgaagagtttaagtggcagagagtggagaagttgtgtaatgaagttaaa
gaattcggcaatgaaatgatcgatgtcgatgaactcgcctctatttacgactttcgtatc
gacaaatttcagcgatcatctattgaagcattttttagaggttcttcggtggtggtttct
gcgccgacaagcagcggaaaaactttgattgctgaagctgcggcagttgccacagtagct
aaacaacgtcgtttattctatacaacacctcttaaggcattgtctaaccagaagtttcgt
gagtttcgggagacgtttggtgacaataatgttggtcttctcactggagattctgccatc
aacagagaagctcagattttaataatgactactgagattttgcgcaacatgttgtatcag
agtgttgggatggtttcttctgagagtggtctttttgatgttgacgtgattgttttggat
gaagttcattatttaagtgatatatctcggggcacagtatgggaggagataataatttat
tgtccaaaagaagttcaaattatatgcctgtcagcgactgttgcaaatgcagatgagcta
gctggctggattggtcagattcatggtaaaactgagttaataacatcatccagacgtcca
gttccgctgacttggtacttctcgacaaagactgcattactacctcttcttgatgaaaag
ggaaaacatatgaacaggaagctctcactcaattatttacaactttctacctcggaagtt
aaaccatacaaggatggtggctctagacgaaggaattcaagaaaacatactgacatgaac
tctaataatattgttaccagctttgggcaacatcaactttccaagaatagcattaatgca
attcgtcggtcacaggttcctcaagttattgatacattatggcacctcaggtcaagggat
atgctaccagcaatttggtttatttttaacaggagaggatgtgatgcagccatccagtac
cttgaagattgtaatctactggatgaatgtgagatgagcgaagttgaactggccttgaag
aggttccggattctgtatcctgatgctgtcagggagcctgccataaaaggacttcttaaa
ggggttgcagcacatcatgctggctgtcttcctatatggaaatcattcattgaagagctt
tttcaacgaggacttgttaaggtagtctttgctactgaaacacttgctgctggaattaac
atgcctgctaggacagctgtcctctcatctctcagcaaaaggactgctagtggacgcatc
cagttaacatcaaatgaactgtttcaaatggcaggtcgtgctggacgcagaggcattgat
aataggggtcatgtggtgttggttcagaccccttatgaaggtgcagaagagtgttgtaag
cttttatttgctggagttgaacctcttgtatcacaattcactgcttcttatggaatggtg
ctgaatctccttgctggtgcaaaagttatgcatttatcaaatgaatctgatgacatgaaa
gctttacaagcaggtagaagtttggaagaagctaggaaattagtggagcagagttttgga
aactatgttgggagcaatgtaatgcttgcagcgaaagatgagctttgtaaaatacagaaa
gagattgatgtgctgacttcagaaattagtgatgatgctatagacaggaaaagcaggaga
cttttgtcggaggcggcatataaggagatggccaatctacaggaagagttgaaggcagaa
aaacgctttcggactgaactgcgaagaaggatggaactgaagagattctctgccctgaaa
gatattttaaaggattttgaaaatggacacttaccttttttgtgtttgcagtacaaagat
tccgaaggagttgaacactcagtccctgctgtttatttggggaagtttgactcacttgat
agttcaaaacttaagaacatggcctcaatcaatgattcttttgcactaaatagattagct
cagtcaaatggggatgactatgatactcaagatgtcaaaccatcttactatgtggctctt
ggttcagataatacttggtacacatttacagaaaagtggatcaaaactgtatataggata
ggcttccctaatgtggctttagctcaaggagatgctttgccacgggaaacaatgagtctc
cttctggataagggggaaatgctgtgggaaaagcttgctgattctgaatttggtggttta
tggtgtatggaaggatctctagaaacatggtcgtggagtttaaatgtgccagttttaagt
agtctttctgaaagtgatgaggtgttgcacatgtcatttgaataccatgatgctgtagaa
aattacaagaaacaacgaacaaaagtagcgcgtttaaagaaaacgatagcacgtacagaa
ggcttcaaagaatacaagaaaattgtagacacagtcaagtttactgaggaaaagatcaaa
cgtttgaaggctagatcaaaacgtttgaccaaaagaatagagcaaattgaaccatctggt
tggaaagagtttttgaggattagcaatgtcatacatgaaactagggcattggatattaac
acacaagtaatttttccattgggtgaaactgcagctgcaattcgaggagaaaatgaactc
tggctcgcaatggttcttagaaacaaaatcttgctagatttaaagcctgcacaacttgct
gctgtttgtgcaagtttagtctctgaaggaatcaaagttcgattatggaagaataacagc
tatatatatgaaccttccactactgttatcaatgtcattaacgttttggatgagcataga
agctcattcttggaacttcaagagaagcatggggtagagataccatgctgtttggatagc
caattttctggcatggtggaagcctgggcttctggtctgacttggagggaaatgatgatg
gattgtgccctggatgacggggatctagctcgcctcttaagacgaacaattgacctattg
gctcagattcctaaattgcctgatgttgatcaaaggctgcaaaagaatgctgtggatgcc
tctaatgtgatggatcgacctccaataagtgagctagctggataa
DBGET
integrated database retrieval system
