Citrus x clementina (clementine): CICLE_v10030593mg
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Entry
CICLE_v10030593mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10030593mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10030593mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CICLE_v10030593mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CICLE_v10030593mg
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
CICLE_v10030593mg
microRNA pathway
RISC loading complex
CICLE_v10030593mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Piwi_N
DUF5568
Mre11_acc_DNA_cap
Motif
Other DBs
NCBI-GeneID:
18044218
NCBI-ProteinID:
XP_006438760
UniProt:
V4TK37
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MEETADESNANKKCNNNNNNTNSKTRTFRGSTNTNPHRHQYQYQYQYQYQYQQHHQLWQY
SNHFGFCNQNQHQNYYPALLPLPPTIPLQLALAPPLPQNQSFVSKTHLHKPSCKLHNPSL
ATSSDAHAHVVNISPEGLCRRNKVAVKGNDGRRITGAKTQALVAARRPDAGGVEGAVISL
LANHFLVQLDPSQRIFHYNVEMSPSPSKEVARLIKQKLVEENSSMLSGAYPAFDGRKNIY
SPVEFENDRLEFFVSLPIPTSKSVLPSGELKELIHKQHQLKLFRINIKLVSKYDGKELSR
YLSKEDNDWIPLPQDYLHALDVVLRENPSEKCIPVGRSLYSSSMGGAKEIGGGAVGLRGF
FQSLRPTQQGLSLNVDSSVSAFHESVGVIPYLQKRLEFLKDLSQRKTRGLSGDQKKEVER
ALKNIRVFVCHRETVQRYRVYGLTEEVTENLWFADRDGKNIRLLSYFKDHYNYNIQFRNL
PCLQISRSKPCYLPMELCMICEGQKFLGKLSDDQTARILKMGCQRPKERKAMIDGVMRGP
VGPTSGNQGREFKLHVSREMTRLNGRILQPPKLKLGDGGHIRDLVPCRHDRQWNFLESHV
FEGTRIERWALLSFGGSHDQKSAIPKFICQLSQRCEQLGIFLNKSTIISPQFEQTHVLNN
VSLLESKLKKIHEAASNNLQLLICVMERKHKGYADLKRIAETSVGVVSQCCLYSNLGKLS
SQFLANLALKINAKVGGCTVALYNSLPSQIPRLFFPDEPVIFMGADVTHPHPLDDFSPSV
AAVVGSMNWPAANKYASRMRSQTHRQEIIQDLGMMVGELLDDFYHELNKLPRRIIFFRDG
VSETQFYKVLQEELQSIREACSRFPGYSPPITFVVVQKRHHTRLFPYDNDPSSAHNQSSD
ENIPPGTVVDTVITHPREFDFYLCSHWGVKGTSRPTHYHILWDDNKFTSDELQKLVYNLC
YTFVRCTKPVSLVPPAYYAHLAAYRGRLYLERSESATLMGSSSAICRAAPPKAAPLPKLS
ENVKKLMFYC
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacagcagatgagtccaatgcaaacaagaaatgcaataacaacaacaacaac
accaacagcaaaacaagaacttttagaggcagtactaatactaatcctcacaggcaccag
tatcagtatcaatatcagtatcagtaccagtaccagcaacatcatcagctgtggcaatat
tcaaaccattttgggttctgtaaccaaaaccagcatcaaaattactacccagctttgctt
cctttgcctcctactattcctttgcaacttgccttagctccacctcttcctcaaaaccaa
agctttgtatcaaaaacccatttgcacaaaccttcatgtaagctccataacccttctctt
gctacttcctctgatgcccatgcccatgttgttaatatttcaccagaggggctttgcagg
agaaacaaggtagctgttaaaggaaatgatggaagaaggatcacgggtgccaaaacacaa
gcacttgtcgctgcaaggaggccagatgctggtggtgtagaaggggcagtgatttctctc
cttgccaatcattttctagtccaattggacccatcacagaggattttccattacaatgtt
gaaatgtcaccaagtccttccaaggaagttgcgcgactgatcaaacaaaaactcgtggag
gaaaattcttctatgctttctggtgcttatcctgcatttgatggcagaaaaaacatttac
agtcctgttgaattcgaaaatgataggcttgagttcttcgttagcctccctattcctact
agcaagtcggtgttgccttctggagaactcaaggaattgatacacaagcagcatcagctg
aaactgtttcgtataaatatcaaacttgtgtcaaagtatgatggaaaggaattgagtaga
tacttgagcaaagaggacaatgattggatcccactccctcaggattatctccatgctttg
gatgttgtcttgagggagaacccgagcgagaaatgtatacctgtggggagatcactatat
tcgtcttcaatgggaggtgcaaaggaaattggaggaggagctgttggattgagaggattc
tttcagagtcttagaccaacacaacaaggactgtccctcaatgtggattcctctgttagt
gctttccatgaaagcgttggagtaattccctacttgcaaaagcgtcttgagtttcttaaa
gacctttcccaaaggaagacgagaggcttgagtggtgatcaaaagaaagaagtggagagg
gccctgaagaacatcagggtctttgtttgccatagagaaacggtacagagataccgggtt
tatggtttgactgaagaagttactgaaaatctttggtttgcagacagggatggaaagaat
ataaggcttctgagttacttcaaggatcactacaattataacatacaatttagaaattta
ccatgtttgcagatcagtaggagcaaaccatgttatcttcctatggagctttgcatgatt
tgcgaaggccagaagttccttgggaagctttcagatgatcagacagcaagaatacttaag
atgggttgccaaaggccaaaagaaagaaaggctatgatagatggagtcatgcgaggacct
gttggtccaacaagtggcaaccagggaagagaattcaaactccatgtttcaagggaaatg
acaagattgaatgggagaatactccaacctccaaagctaaagcttggtgatggaggccac
ataagagatcttgttccttgccgccatgaccgccaatggaactttcttgagagtcatgtc
tttgaaggaacacgaattgaaaggtgggcactgttaagttttggtggcagccatgatcag
aagtccgccattccgaagttcatttgccagttatctcaacggtgtgagcaattgggaatc
tttcttaacaaaagtacaatcattagccctcaatttgaacaaacccatgtgcttaataat
gtttctctcttggaatctaaactcaagaaaatccatgaagctgcctcaaacaatctccag
cttctcatatgtgttatggaaaggaagcacaaggggtacgcagatttgaaacgaatagca
gaaactagtgttggggttgtaagtcagtgttgcttgtactcaaatcttggcaagttgagt
tcacagtttctggcaaatttggctctcaagatcaatgccaaggttggtgggtgcactgta
gctttgtacaactcattaccctctcagataccgcgccttttctttcctgatgagccagta
atctttatgggagctgatgtcactcatcctcacccactagatgatttcagtccatctgtt
gcagccgtggttggcagcatgaactggccagcggctaacaagtatgcgtcaaggatgagg
tcccaaacacatcgacaagaaataatccaagatcttggtatgatggttggagaattactt
gatgacttttaccatgaattaaacaaacttcctcggagaataatcttcttcagagatggg
gtaagtgaaactcaattttataaagtgctgcaagaggaactacaatcgatcagagaagct
tgttcaagatttcctggttatagtcctcccattacgtttgtagtggtacaaaagagacac
cacacaaggctgtttccatatgacaatgatccatcttcagctcacaatcaatcttctgat
gaaaacattcctccagggactgttgtagatactgtgataactcatccaagggaatttgat
ttctatctttgcagccactggggagttaagggaacaagcaggccaacacattatcatatt
ctatgggatgataacaagttcacttctgatgaactacagaagctagtttacaatctgtgc
tacacgtttgtgaggtgcaccaagcctgtttcattggtgcctccggcttactatgcccat
ttggctgcatacagaggtagactttaccttgaacgttcagaatcagcaactttaatggga
agttcttctgcaatctgccgagctgcccctccaaaggcggcgcctctaccaaaacttagt
gagaatgttaagaaactcatgttctactgctaa
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