Citrus x clementina (clementine): CICLE_v10030601mg
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Entry
CICLE_v10030601mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CICLE_v10030601mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10030601mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-60S particles
GTPases
CICLE_v10030601mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
EFG_III
GTP_EFTU_D2
SRPRB
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
18043564
NCBI-ProteinID:
XP_006437633
UniProt:
V4SSQ9
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MGDSDTRKIRNICILAHVDHGKTTLADHLIAATGGGLLHPKLAGKLRFMDYLDEEQRRAI
TMKSSSIALHYKDYAINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QSWIEKLTPCLVLNKIDRLISELKLTPLEAYNRLLRIVHEVNGIMSAYKSEKYLSDVDSL
LSVPSEKLGDENLQFIEDDEEDTFQPQKGNVAFVCGLDGWGFSISEFAEFYATKLGASTA
ALEKALWGPRYFNPKTKMIVGKKGISTGTKARPMFVQFVLEPLWQVYQAALEPDGDKGVL
EKVIKSFNLSIPPRELQNKDPKAVLQAVLSHWLPLSDAILSMVVKCIPDPISAQSYRISR
LLPKREILDNDVDCNVLTEADFVRKSVEVCNSSPEAPCVAFVSKMFAVPIKMLPQRGSNG
EILDNYADKGGNGESEECFLAFARIFSGVLYSGQRVFVLSALYDPLKVESMQKHIQEAEL
QSLYLMMGQGLKPVASAKAGNVVAIRGLGQQILKSATLSSTRNCWPFSSMVFQVSPTLRV
AIEPSDPADMGALMKGLRLLNRADPFVEVSVSSRGENVLAAAGEVHLERCIKDLKERFAK
VSLEVSPPLVSYKETIEGDTSNPLQNVILLSGSSDYFEKTTPNGRCVVRVQVMKLPFTVT
KVLDECADLLGIIIGGQANKSLETQRSSSGEDDNPIEALRKRIMDAVEDHISAGNENDQY
RMEKCKVKWQKLLRRIWALGPRQIGPNILFKPDDKQIDTESSVLVRGSAHVSERLGFVDN
SDDGDAAEEIPPGVNRASFVEAQSLESSIVSGFQLATASGPLCDEPMWGLAFIVEAYISP
VAGKYVDSETSQQSEQHGIFSGQVMTAVKDACRQAVLKKKPRLVEAMYFCELNTPVDSLS
KMYGVVSRRRARVLKEEMLEGSALFTVHAYLPVSESFGFADELRKETSGAASALLALSHW
EELPEDPFFVPETAEEKEEHGDGSSVLHNTARKLMDAVRERKGLPVEKKVVEHGAKQRTL
ARKV
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactctgatacacgaaaaatccgaaacatatgcatactggctcatgttgatcac
ggtaagacaacacttgctgatcatctgattgccgccaccggcggcggtttacttcaccct
aaactagctggtaaacttaggtttatggattatcttgatgaggaacaaaggcgtgctatt
acgatgaagagctcttcgattgctcttcattataaagattatgctattaaccttatagac
tcccctggccatatggacttttgtagtgaggtttccaccgctgctcgtttgagtgatggt
gcattggtgttggttgatgctgttgagggtgttcacattcagactcatgccgttttgcgg
caatcttggattgagaagttgactccgtgtttggtacttaataagattgataggttgatt
tctgagttgaagttgactccgttggaagcgtataaccggttgttgaggattgttcatgaa
gtgaatgggattatgagtgcgtataagtcggagaagtatttgtctgatgtagattcttta
ctttcggtgccatcagagaagctaggcgatgagaatcttcagtttatagaggatgatgag
gaagatacatttcaaccgcagaagggtaatgtagcatttgtgtgcggattggatggatgg
ggttttagcataagtgagtttgccgaattttatgctacaaaacttggggcaagcactgct
gcattggagaaggctttgtggggtcctcggtatttcaatccaaagacaaagatgattgtg
gggaagaagggaataagtacagggactaaggctcggcccatgtttgtacagtttgttcta
gagccattatggcaggtttaccaggctgctttagaaccagatggggataaaggggtgctt
gagaaagtgattaaatcatttaatttgtctattccgcctcgtgaattgcagaacaaggat
ccaaaggctgtgcttcaggctgtcctgagccattggctccctctatctgatgcaatcttg
tcgatggtagtgaaatgtatacctgacccaatttctgctcaatcctatcggatttcccgt
ttgcttcctaaaagagagattttggataatgatgttgattgcaatgtactaacagaggct
gattttgtgagaaagtcagttgaggtttgtaattctagcccagaagctccatgtgttgct
ttcgtttcgaagatgtttgctgtccctatcaaaatgctgcctcaaagaggttcaaatggg
gagattttggacaattatgctgacaaaggtggaaatggtgaatcagaagagtgcttcctt
gcatttgcaagaatctttagtggagttctttattcaggacaaagagtttttgtgctttca
gctttgtatgatccattaaaggtggaatcaatgcagaagcacatacaagaagcagagttg
caatccttatatctaatgatgggtcaaggcttgaaaccagtagcatctgccaaggcagga
aatgttgtggcgatccgaggtctgggtcagcaaatattgaagagtgcaactctttcatct
acaagaaactgttggcctttctcgagtatggtattccaggtttcccccactttaagagtt
gcaattgaaccatctgatccagcagatatgggcgctttgatgaaaggtttgaggcttctg
aatcgagcagatccatttgtggaggtttctgtttcatctcgtggggaaaatgtacttgct
gctgcaggagaggttcatctggaaagatgcataaaggatttgaaggagaggtttgctaag
gtaagtttggaagtctctccgcctcttgtgtcctataaagagaccattgagggcgataca
tctaatccattacagaatgtgatattgttgagtgggagctcagattattttgagaaaaca
actccaaatgggagatgtgttgttcgagtgcaagtcatgaaacttccttttacggtgact
aaggtgcttgatgagtgtgctgatttgcttggaattattattggagggcaagccaataaa
agtttggaaacccagagatcaagcagtggtgaggacgataacccaattgaagctctcaga
aaacgcataatggatgccgtggaggatcatatttctgctgggaatgagaatgaccagtat
cggatggagaaatgtaaagtaaagtggcagaaacttcttaggaggatttgggcacttggt
ccaaggcagattggtcctaacatcctcttcaaaccagatgataaacaaattgatactgag
tcctctgttcttgtaaggggttctgctcatgtatctgagagattaggctttgtggataac
tctgatgatggtgatgcagctgaggagatacctccaggagttaatcgagcttcatttgtg
gaagcacagtctctcgagagcagcatagtgtctggatttcagctagctacagcatctggt
cctttatgtgatgaaccaatgtggggattggcttttattgttgaggcttacatctctcct
gtggccgggaaatatgttgactctgaaacttcccaacaatctgagcagcatggcatcttc
tctgggcaagttatgacagctgttaaagatgcatgtagacaagctgtgctcaagaagaaa
ccccgacttgttgaagccatgtatttttgtgagttgaacacaccggttgattctttgagt
aaaatgtatggagtggtttcccgaaggcgggcccgagtgctgaaggaggaaatgctggaa
ggttctgcacttttcacggttcatgcttatttgcctgtttctgaaagttttggttttgct
gatgagcttaggaaagaaacttctggtgctgcaagtgctcttcttgcccttagccactgg
gaagaacttcctgaggatcctttctttgtacccgaaacagcggaggagaaggaagagcat
ggagatggttctagtgttcttcacaatacagcaagaaaactcatggatgctgtgagggaa
cggaaaggcttacctgtcgaaaaaaaggtagtggagcatggagctaaacagaggacctta
gctcgcaaagtttga
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