Citrus x clementina (clementine): CICLE_v10030606mg
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Entry
CICLE_v10030606mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
cic
Citrus x clementina (clementine)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNase
TUDOR
Collagen
Planc_extracel
Motif
Other DBs
NCBI-GeneID:
18045229
NCBI-ProteinID:
XP_006436994
UniProt:
V4VCZ9
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MATPAAAGGGWYRARVKAVPSGDSLVITALSNPNPGPPREKTLTLSSIITPRLARRGGLD
EPFAWDSREFLRKLCIGKEVTFRVDYAVPNIGREFGTVILGDKNVAMLVVSEGWAKVKEQ
GSQKGEASPFLAELLRLEEQAKLQGLGRWSKVPGAAEASIRNLPPSAIGDSSNFNAMALL
DANKGRPMQGIVEQARDGSTLRVYLLPEFQFVQVFVAGIQAPAVARRPAAIVDTDTEETN
GDVSAAEAVAPLNSAQRLAASTASAGQQSTDEPFALDAKYFTEMRVLNREVRIVLEGVDK
FKNLIGSVFYPDGETAKDLAMELVENGLAKYIEWSANMMEEDAKRRLKAADLQAKKTRLR
MWTNYVPPQSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPYGNALAERRVNLSSIRCPK
IGNPRKDEKPAAYAREAREFLRTRLIGRQVNVQMEYSRKVVVEAAPVAAGAKGPAGTKGP
AGTKGQAAAKGPAGEESVGATETRIIDFGSIFLLSPIKGEGDDASAVAQSNAAGQPAGVN
VAELVVSRGLGNVINHRDFEERSNYYDALLAAEARAKAGKKGCYSSKEPPVMHIQDLTMA
PVKKARDFLPFLQRSRRIPAVVEYVLSGHRFKVLIPKETCSIAFSFSGVRCPGRNERYSN
EALLLMRQKILQRDVEIEVETVDRTGTFLGSLWESRTNVAVILLEAGLAKLQTSFGSDRI
PDSHLLEQAEKSAKSQKLKIWENYVEGEEVSNGAAVEGKQKEVLKVVVTEILGGGKFYVQ
QVGDQKVASVQQQLASLNLQEAPVIGAFNPKKGEIVLAQFSADNSWNRAMIVNAPREKVE
SVNDKFEVFYIDYGNQELVPYNKLRPIDPSLSSTPPLAQLCSLAYIKIPALEDEYGPEAA
EFLNEHTYNSSNEFRALVEERDSSGGKLKGQGTGTLLHVTLVAVDAEISINTLMVQEGLA
RVERRKRWGSRDRQAALENLEKFQEEAKTARIGMWQYGDIQSDDEDPLPSAVRKVAGGRR
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgccagcggcagccgggggaggatggtacagagcaagagtgaaagctgttcca
tccggtgacagcttggtgataacagccttgtccaacccgaatcctggacctccacgggaa
aaaactctcactttatcatctattattacacctcggctggcccgcagaggtggtttagat
gagccatttgcatgggacagcagagaatttctgaggaagctctgcataggaaaggaggtc
acattccgagtagattatgctgtacccaacataggccgagaatttggcacggtcatcctc
ggtgacaaaaatgtagcaatgctggttgtctcagaaggctgggcaaaggttaaggagcag
ggttcccagaagggggaagcaagtcctttccttgcagaactgctacggctcgaagagcaa
gcaaagctacaaggtcttggccgctggagcaaggtaccaggtgctgctgaggcttccatt
aggaacctaccaccatctgccattggtgattctagtaacttcaatgctatggctctgtta
gatgcaaacaagggaagacctatgcaaggtattgttgagcaggctcgagatggcagcact
ctccgtgtatacctgcttccagaatttcagtttgtccaagtttttgttgctggaatccag
gctccagctgtggctaggaggcctgcagctattgtcgacacagatactgaggagaccaat
ggagatgtttcggcggctgaagcagtagctcctctgaattctgctcagagacttgcagcc
tcaacagcctcagctggacaacaatccactgacgaaccatttgcattagatgccaaatat
tttacggaaatgcgtgttttgaatagagaggtccgtattgtcctggaaggtgttgacaaa
ttcaaaaatttgattgggtcagtgttttatcctgatggggaaacagcaaaggacctagca
atggagctcgtggaaaatggcttagcaaaatatattgaatggagtgcaaatatgatggaa
gaagatgctaaacgacggctaaaggccgctgaccttcaagccaagaaaacccggttgagg
atgtggacaaactatgtgccaccacaatcaaattcgaaggctattcacgaccagaatttt
acaggcaaggttgtggaggttgttagtggtgactgcattattgtggctgatgattctatc
ccatatggcaatgcattggcagagagacgagtaaatctttctagtattaggtgtcccaaa
attggtaatcctcgtaaagatgaaaagccagctgcctatgctagggaagcaagggagttt
ctgagaacacggctcattggccggcaagtgaatgttcaaatggaatattccaggaaggtt
gttgtggaagcagcaccagtggcagctggggctaaagggcctgctgggactaaagggcct
gctgggaccaaagggcaagctgcagctaaagggccagctggggaagagtctgtgggggct
acagaaacaagaataattgattttggatcaatcttcctcctgtctcccattaagggtgag
ggtgatgacgcatcggcagtggcccaatctaatgctgctggccagcctgctggagtgaat
gttgctgagctggtagtctcacgtggccttggcaatgtgattaaccatcgagattttgag
gaaagatcaaattattatgatgcccttcttgcagctgaagcacgtgccaaggctgggaag
aaagggtgttactcttcgaaggaacccccagtcatgcacatacaagacctgactatggca
cccgtcaagaaagctagagattttttgccgttccttcaacggagtaggagaattcctgca
gttgttgaatatgtcctcagtggccaccgctttaaggtgttgattcccaaggaaacatgt
agcattgccttttcattctctggtgtccgatgtcccggtcgtaacgagcgctattcaaat
gaagcgcttttactaatgagacaaaagattttgcagagagatgttgagattgaagtggaa
acagttgatagaaccggcactttcttgggatccttatgggagtcaaggaccaacgtggca
gtgattcttcttgaagctggcctggcaaagctacaaacatcttttggcagtgacaggatc
ccagacagtcatcttcttgagcaggctgaaaaatctgctaaatcacagaaactgaagata
tgggagaattatgttgaaggagaggaagtgtccaatggtgcagctgtagaaggcaaacag
aaagaagtgctaaaggtggtggttacagaaattttgggaggtggaaaattttatgttcag
caagttggtgatcagaaagttgcctcagttcagcaacaacttgcttctctgaatctccaa
gaagctcctgtaattggtgcttttaaccctaagaagggcgaaattgttcttgctcaattt
agtgcagataattcctggaatcgagctatgattgtcaatgcacctcgggagaaggttgaa
tctgtaaacgacaaatttgaagtattctatattgattatggaaatcaagagttggttcca
tacaataagctgaggcctattgatccatcattatcgtcgacaccacctcttgctcagcta
tgcagccttgcctacatcaagattcctgccttggaagatgagtatggtcctgaagcagct
gagttcttgaatgaacatacgtataacagttcaaatgaatttagggccttagtggaagaa
agggattcttctggaggaaaactcaagggacagggaactgggacacttcttcatgtaact
ctggttgctgtggatgctgagattagcataaatactcttatggttcaggaaggacttgca
agggtagagaggaggaagagatggggatccagagacagacaggctgcccttgagaatctt
gaaaaattccaggaagaagctaagactgctaggattgggatgtggcagtacggagatatt
cagtctgatgatgaggacccattaccttctgctgtgagaaaggttgctggaggccgacga
tga
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