Citrus x clementina (clementine): CICLE_v10030624mg
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Entry
CICLE_v10030624mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CICLE_v10030624mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cic01007
]
CICLE_v10030624mg
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cic03016
]
CICLE_v10030624mg
Enzymes [BR:
cic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
CICLE_v10030624mg
Amino acid related enzymes [BR:
cic01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CICLE_v10030624mg
Transfer RNA biogenesis [BR:
cic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CICLE_v10030624mg
Prokaryotic type
CICLE_v10030624mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
PRTRC_E
Motif
Other DBs
NCBI-GeneID:
18044803
NCBI-ProteinID:
XP_006437524
UniProt:
V4VEB3
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MTGLLRKTETASFVATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPA
TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT
RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR
LPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCS
EIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT
SILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFA
IADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQRE
AHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMA
EERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFF
WFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLESSSFYAEQGGQIFDEGFIEGLFGSFYV
RNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLG
DHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRI
NGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFAL
LSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGA
AIPAPKKADIRAKIALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVE
VGLDAAAVREAVLKVIEQGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAAL
QPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtctgttgcgtaaaactgaaacggcatcttttgtggcgacggctagggttttg
ttaaatccatccctcaccctcgcagtcacaaatcaccatcactcgttaatttctcgtttc
tcagcttcagccgtagcagccatgccaggcgctgatcctcaagtggtggagtggccggcg
accaaagtacgagacacttttttcaaattcttcgaagataagaaccatgtcaactggaaa
tccagccccgtcgtgcctgtcaatgaccctactctcttgttcgccaatgccgggatgaat
cagtacaagccgatttttcttggaaccgcggatccgaatactcaattgagtaagctgacg
cgcgcgtgtaacactcagaagtgtatacgcgccggtggtaagcataatgatttagacgat
gtggggaaggacacttatcaccacaccttctttgagatgcttggtaactggtcttttggt
gattattttaagaacgaagctattgaatgggcttgggagttgcttaccaaggtttatagg
ttaccggctgatagactttatgctacttattttggcggtgatgagaaagctgggcttgca
cctgataatgaagctagagacatttggctcaagtttttaccagcttcgcgtgtactgcct
ttcggttgtaaggataatttctgggagatgggtgatactggtccttgtggtccttgcagt
gaaatacactacgacagaactggtaaccgggatgctgcttcattggttaataatgacgat
cctacttgcattgagatatggaacattgtgtttattcagttcaaccgggaaagtgatggt
tctctaaagcctctccctgccaagcacgttgacactgggttgggttttgaaagattaact
tctatattacagaacaagatgagcaactatgatactgatgtgttcatgcccatctttgat
gctattcaacaagcaactggggcccggccatattctggaaaagttggagcagatgatgca
gacaaagttgatatggcctatagggttgtcgctgaccacattagaactctctcgtttgcc
attgctgatggttcttgcccaggcaatgagggccgtgaatatgttctaaggcgtattctt
cgtcgagctgtacgatatggaagcgaggtcctaaaagcccaagatggatttttcaatggg
cttgtaaatatcgtggtgaaagttatgggtgatgtttttcctgagctgaagcaacgtgaa
gctcacatacgggagatcattgcggctgaggaagcaagttttggcaaaactttgcttaaa
ggaattgagaaatttaagaaggctgctcaggatgttcaagggaaagttttgagtgggcag
gatgcatttatcttgtgggatacatatggattccctttagatttgactcagttaatggcg
gaagaaagaggcttactagttgacattgagggtttcaacaatgctatggatgaggcacgg
gaaagatcgaggagtgcacaaaataagcaagctggtggtgctattgtcatggatgctgat
gccactgctgcattgcataagagaggagttttggcaacagatgattccttcaaatttttt
tggtttcaggaccataaaagtgtaataaaagctatttacactggttcagagttcatagaa
agtgttgttcccggcaatgaagtcggtatcgttttggagtcttccagtttctacgctgag
caaggtggtcagatttttgatgagggatttattgaaggcctctttggctcattctatgta
cgtaatgttcaaatttatggagggtttgttattcatattggttctcttacggaaggggct
ggcagattttctgtcggtgaggaagtaatttgtaaggttgactatgataggagaaagctt
attgcccctaatcatacctgcacacatatgttgaactttgctcttagggaagtacttggt
gatcacgtcgatcagaaagggtccgttgttcttcctgaaaagttaagattcgacttttct
catggcaaaccagttgatcctgagcatttaagaagaattgaatcaattgtaaacgagcag
ataaaagctgaattagatgtgttttcaaaggaggcaacacttgctgaagccaagcgcatc
aatgggttgcgagctgtttttggagaagtttatcctgatcctgttagagtagttgcaatt
ggtcggaaggttgaggatctattggctgatccagaaaataaagaatggttgtcaatttca
gcagaactatgcggaggaacccatttatcaaatacccgagaagctgaagcatttgctctt
ttatctgaggagggtattgctaaaggaattagaaggataactgctgttacaactgggttg
gcttataaggcatttgaagcagcatgttcgcttgagaaggaagtagatgatgcatcaaaa
atagaaggaagcttgctggaaaagacagtggcttctttaaagagtaaagtggatggagca
gcaattccagcacccaagaaagctgatatcagggctaagattgcgttacttcagaatcaa
gtgaggaaggcgcaaaagaaggttgccgaagaaaatcttcagaaagctgtcaaggtggca
actgagacggctgaagctgctgcttcaaatggaaaacccttctgcatctctcgtgttgag
gttggattggacgcagctgcagttcgtgaggcagttctgaaagtcatagagcagggcatg
ccggtcatggtcttcagtaccgatgaaaccacgaataaggctgtcgtatgtgcaggtgta
ccagagaaatcagaccagagcaaacagttggaggtgtcagagtggttgacagcagctttg
cagccactgaaagggaggtgtggtaaaggtaaaggaggtcttgcttctggacagggaaca
gatgcggcccaagtgaccccggccatggatttggcagcagaatttgcggcaatgaaattg
aggtga
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