Citrus x clementina (clementine): CICLE_v10030682mg
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Entry
CICLE_v10030682mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10030682mg
Spliceosome [BR:
cic03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
CICLE_v10030682mg
Other components
Complex C specific factors
CICLE_v10030682mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
T2SSM
Motif
Other DBs
NCBI-GeneID:
18044588
NCBI-ProteinID:
XP_006437402
UniProt:
V4TBM5
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MDEDQEMEKFGMDNDFEGGQWINGEFYYKKRRAKPTQTKDDVLYGVFADDSDEDDDDGYS
SKKRRKDRDFGRKADLTKPVNFVSTGTVMPEQEIDKNVKEENVDMFEDDDSGNRSGVGLG
FGSGNPASASGLGFSASNSKKSDNGVKVSDEACDGDDSFLQTPFGRRIKEEAQRKEKERE
REKEREKLRSEKRTQGGKGGDIGVGNVVMKMMEKMGWYKGRGLGKDEQGITAPIEARLRP
KNMGMGYNDFKETEAAKLPGLEKLEDKKTAGQQQLKGRNKERLWSKLKVKKKEEYITAEE
LLENKREQVVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNVRLIVDLAEVD
IQKIDKDLNNARETALSLQKEKENLEKTAAEQKQQLDNMETIVNVLGQIEKEHTLGTLTL
VSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKN
VLQTDDSQDIWDLSTPYSQLISEVVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSV
LHTILDTVVLPKLTSAVDSWDPRRETVPIHVWVHPWLPLLGHKLEGLYQMIRMKLSNVLD
AWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPKLQIALQEFQINPLEQKLDQFNWVM
PWASAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPEELLANQN
IRAQLNVGLDMMSQAAEGGIVVQPGTVENISYLKAREQRQFEAQQKAAAQAQQAAAAAAG
LGSATQMNGMDGRQMTLKEVIEAYAQQHELLFKPKPGRMHNGQQIYGFGNISIYVDSLNQ
MLYAQKPEGWTPVTLDTLLKMHHNSLTRRR
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaccaggagatggagaaattcggaatggacaacgacttcgaaggcggccag
tggataaacggggagttctattacaagaaacgcagagcgaagccgacgcaaactaaagac
gacgtcttgtacggcgttttcgccgacgattccgacgaagatgacgacgatggttactcc
tccaaaaagcgaagaaaagaccgcgattttggacgaaaggccgatttgacgaagcccgtt
aattttgtttcaacaggtactgtgatgcctgagcaagagattgataagaatgtgaaagaa
gagaatgttgatatgtttgaagatgatgatagtggaaataggtctggtgtaggtcttggt
tttggatctgggaatcctgcttctgcttcagggttagggttcagtgcgagtaattcgaag
aaaagtgataatggggtgaaagtgagtgatgaggcatgtgatggtgatgatagcttctta
cagactccatttggcaggaggataaaggaagaggcgcagaggaaggagaaggagagggag
agggagaaggagagggagaagttgagatcagagaaaagaactcaaggaggaaaaggtgga
gatattggtgtcggcaacgttgtgatgaaaatgatggagaaaatggggtggtataaagga
cgtggattggggaaggatgagcaagggattacggcaccgattgaagcaaggttgagaccg
aagaatatgggaatgggatacaacgattttaaggagactgaagcagcaaagttgccaggt
ttggagaaattggaagacaagaagactgcagggcagcagcaactgaaagggagaaataag
gagaggctttggtcaaagctgaaggtgaagaagaaggaagagtatattacagcagaggag
ttgttggaaaataaaagagaacaggttgttcagaaagtgattgatatgcgagggccacag
gttagggttttgacaaacttggagaatttggatgctgaagaaaaggcaagggagaatgat
gttccaatgcctgagctgcagcataatgtgaggttgattgtggatctggctgaggttgat
atccagaagattgataaagatttgaataacgcgagggagacagcgttgagcttgcaaaag
gagaaggagaatttggaaaagacagccgcggaacagaaacagcagttggataatatggag
acaattgttaatgtcctgggccaaattgagaaagagcatacattaggaacattaacgttg
gtctcgctcgcaaattatttcagcgacttacataagagatttgctaatgattataagctt
tgtaacttggcctctattgcttgctcatttgccttgcccttgtttataaggatgttccaa
ggttgggatcctctccaaaatccatctcataaaatggaggtggtattgatgtggaagaat
gtgctacaaaccgatgatagtcaagatatatgggatttatcaacgccatattctcagttg
atatcagaagttgttttacctgctgtgagaatagctggcatcaatacctgggatcccaga
gaccctgagcagatgcttagatttttggagtcttgggaaaagttgctgccatcttcagtt
cttcataccatattggatacagtagttttgccaaaattgacaagtgctgtggattcatgg
gacccacgtcgtgaaactgttccaatccatgtttgggttcatccatggctgccattgttg
ggacataaattggagggtttgtatcagatgatacgcatgaagttgagtaatgttcttgat
gcttggcatccaagtgatgcatctgcttacaccattttgtcaccttggaagactgtgttc
gattcagcaagttgggaacagcttatgcgtcgatatatagttccaaagttgcagattgcc
cttcaagaattccaaataaatcctctagaacagaagcttgatcagttcaattgggttatg
ccgtgggcttctgctgttccaactcatcttatggttgatttgatggagagattcttcttc
accaagtggctgcacgttttgtatcattggttaaacacagctccagactttgaagaaatt
catagatggtatttgggttggaaaggacttattccagaggaacttttagcaaatcaaaat
attcgggctcagcttaatgttggtcttgacatgatgtcccaagctgccgaaggtgggatt
gtggtccaacctggtacggtagagaacattagttatcttaaggcacgggagcagagacag
tttgaggcgcagcagaaagcagcagcacaagctcaacaagcagctgctgcagcagcaggc
ctaggtagtgcaacccagatgaatggtatggatgggcgtcaaatgactttgaaagaagtc
attgaggcttatgcccagcaacatgagttgctatttaagcctaaacctggcaggatgcat
aatggtcagcaaatttatggctttggtaacataagtatatatgtggactccctaaatcag
atgttgtatgcccaaaagccagaaggatggactcctgtaacacttgacacattgctgaag
atgcatcataattcattaacaaggagacgttga
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