Citrus x clementina (clementine): CICLE_v10030882mg
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Entry
CICLE_v10030882mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03440
Homologous recombination
cic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CICLE_v10030882mg
03460 Fanconi anemia pathway
CICLE_v10030882mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10030882mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
CICLE_v10030882mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
Motif
Other DBs
NCBI-GeneID:
18043867
NCBI-ProteinID:
XP_006438894
UniProt:
V4VHS5
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MIEIEMENHSKRRVVCPENEELAMYMLQKRQEMAETPKGLSENIDMTLSKAYNNICDAKN
PIKTLKDLSQVKGVGKWILKLMQEFFETDSGGSEPEDLTAKSKKSKAVKTKGTKRYMPQR
NSVAYALLITLYRGTTNGNEFMRKQDLIDAAEASGLSHTPIMPEKGKGKPGQFGSSPRDW
YSGWSCMKTLITKGLVVKSSCPAKYMLTPGGREAARECLSRSGFADSIENVVNGKDSDKN
ERSELDLVLAHPDSNGEVTECFVPLSRKEKSTDVPFESLERFTRMGYSKEQVLQAFGEVS
ETSQHKEISSLWPAVLCRLREDEVYALHLELHSVREDYNAASRTCISTNGRVDLEGSWSN
QKGSGSGGENVPHFSNGSTPSLFTLKACSSSDYSAKWSRSDDPKTRVNLLSVPPLSFGER
FEDAYEVVLILDDREQFAVQGSRSRRIIENVCSQFKIQMEVRRLPVGDGIWIARHRQTQS
EYVLDFIVERKKVDDLHSSIRDNRYRDQKLRLVRCGLKKLIYLVEGDPNSSEAAESIKTA
CFTTEILEGFDVQRTSGLADTLRKYGYITQAITEYYKVELPEDQLKCAAVCPPFNEFLKR
CQDLDKMTVSDVFAVQLMQVPQVTEEIAITVLDLYPTLLSLAHAYSILEGDVCAQEEMLW
KQSNNAVSASASRNIFQLVWGK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatcgaaatggagaatcacagcaagaggcgtgttgtgtgtccggagaacgag
gaattggcaatgtacatgttgcagaagaggcaagaaatggcggagacgccgaaaggttta
tcggagaacatcgacatgaccctgtccaaggcttataacaacatttgcgatgcaaagaat
ccaatcaagactctgaaagatttgtctcaagtcaagggtgtggggaagtggattctcaag
ttaatgcaagagttctttgagaccgattctggtggttctgaacccgaagacttgaccgcc
aaaagtaagaaaagcaaagcagtgaaaactaaaggaaccaaacggtatatgccacaaagg
aattctgtggcatatgcactgttgattactttgtacaggggaactacaaatgggaatgaa
tttatgcgtaaacaggaccttattgatgcagctgaagcaagtggcctttctcacacgcca
attatgccagagaaaggaaaaggtaaacctggtcaatttggaagttctccaagggactgg
tatagtggttggagctgcatgaaaactttgataactaaaggattagttgtgaaatcaagt
tgcccagccaagtacatgctgactccgggagggcgagaagcagcacgggaatgccttagc
agatctggttttgcagattctatcgagaacgtggtcaatggaaaggattctgataagaac
gaacgcagtgaactggatttggtgctcgctcatcctgattcaaatggagaagtgacagag
tgttttgtgcctttgagtaggaaggagaaatcaactgatgttccttttgaatctcttgaa
aggttcacgcggatgggatattccaaggaacaggttcttcaggcgtttggtgaagtttca
gaaacctcccaacacaaggagatctcgtctctctggcctgctgttttatgtcgtcttcga
gaagacgaagtctatgctctgcacttagagctgcacagtgtaagagaggattacaatgca
gcatcaagaacttgcatttctacaaatggtcgagtagatcttgaaggaagttggagtaat
cagaagggttctggttctggtggtgagaatgtgccgcacttctctaatggctccacacca
agcttgtttaccttgaaagcttgctcatcatctgattattctgcaaaatggtcaaggtca
gatgatccgaaaacaagagtgaatcttttaagtgtaccacctctaagctttggggagaga
tttgaggatgcatatgaggtagtcttaatattagatgatcgggagcaatttgctgttcaa
gggtcccgttccaggagaattattgaaaatgtctgctctcagttcaagatccaaatggag
gttcggcgtttaccagtaggtgatggaatctggatagcccgccacagacaaactcagagt
gaatatgttctagattttattgtcgagaggaagaaagttgatgatttacactcttcaatc
agggacaatcgctatagggatcaaaaactcaggcttgtgagatgcggacttaaaaagctg
atatatcttgtggaaggtgacccaaattcttctgaagctgctgagagtatcaaaacagct
tgttttacgacggagattctggagggatttgatgtacagagaactagtggtttagccgat
acattgaggaagtacggttatattactcaagcgataactgaatattataaagtagagctg
cctgaggaccagcttaaatgcgctgcagtctgtcctcctttcaatgaatttctcaaaagg
tgccaagatctggataaaatgaccgtcagtgatgtatttgcagttcagcttatgcaggtg
ccacaggtaacagaggagattgccattactgttttggatttgtaccctacacttctatct
cttgctcatgcttactccattcttgaaggtgatgtttgcgcgcaagaggagatgctttgg
aagcagagtaacaatgcagtcagtgcaagtgctagtagaaatattttccaactagtttgg
ggcaagtga
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