Citrus x clementina (clementine): CICLE_v10031042mg
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Entry
CICLE_v10031042mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10031042mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10031042mg
Spliceosome [BR:
cic03041
]
Complex C
Other components
Step II factors
CICLE_v10031042mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_EIPR1
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
eIF2A
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
18043790
NCBI-ProteinID:
XP_006438397
UniProt:
V4SUW2
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MDLLQNYADEKEDELDKPENQNDQNPDSAALESSPPRILPSKSAAPQVDDTTLALTVAQA
RQTQSRPIDPSQHVVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSF
VFDEQYNTFYKYGYAADPAGSNYIGDLDALEKNNAISVYNIRQNEQKKRKLERKQEAEGG
DGMAVDVDPAEVNNPATDSWLMKNRKSPWAGKKEGVQTELTEEQKKYAEEYAKKKEDKGN
AGGEKGEHVEDKSTFHGKEEKDYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVS
AIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASY
DKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ
EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPN
TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC
WFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctccagaactatgctgacgaaaaagaagatgagctagataagccggaaaac
caaaatgaccaaaatcctgattctgcagcactggaatcatcaccaccacgtatactccca
tccaaatctgctgcgcctcaagttgatgataccacgctggctctaactgttgcccaagcc
cgccaaacccaatccaggcccattgaccccagtcaacatgttgttgcctacaaccccaca
tacgaacagctgtgggcccctatatacggtccagcccatccttatgccaaggatggcatc
gcccagggcatgcgcaaccacaagcttggttttgtagaggatgcctctattgattcgttt
gttttcgatgaacaatacaacaccttctacaaatacggctatgctgctgaccccgctgga
agcaattacattggtgatttggatgctttggagaaaaataatgccatctcggtgtacaat
atacgtcaaaatgagcaaaaaaagagaaagttggagaggaaacaggaagctgagggtggt
gatggtatggctgttgatgtggatcctgcggaggttaataatcctgcaactgactcttgg
ctgatgaagaatcggaagagcccatgggcaggtaaaaaggagggagtacaaacagagttg
actgaagaacaaaagaagtatgcagaggagtatgcaaagaagaaagaagataaaggtaat
gcaggcggtgagaaaggtgagcatgtggaggataagagtacttttcatggcaaagaagag
aaggattatcagggtaggtcctgggttgctcctcccaaagatgctaaagcagccaatgat
cattgttatattccaaagaggttggttcacacttggagtgggcataccaagggtgtttca
gcaattcgattcttccccaaatatggacatttgattctctctgcagggatggatactaag
gtgaagatttgggatgtgttcaattcaggcaagtgcatgaggacttacatgggtcattca
aaggctgttcgtgatatttcattttgcaatgatgggactaaatttttgacggccagctat
gataagaacatcaagtactgggatacagaaactgggcaagttataaggactttctcgacc
gggaagattccatacgtagttaagcttaatccggatgatgataagcagaatattttgttg
gcaggtatgagtgataagaagattgttcagtgggatatgaacacaaaagaaattactcaa
gagtatgatcaacacttgggagcagtgaatactattacatttgtggacaataacaggaga
tttgttacttcaagtgatgacaagtctctccgcgtatgggaatttgggattccagtggtt
ataaagtatattagtgagcctcacatgcactcaatgccatcaatttcgcttcatcccaat
accaattggttagctgcgcagagtttggataatcagattcttatttatagcacaagggag
aggttccagctgaataagaaaaagaggtttgctgggcacattgtggctggatatgcttgt
caagtcaatttctctccggatggacggtttgttatgtcgggagatggtgagggtaagtgc
tggttttgggactggaagagctgcaaagtgttcaggaccctcaagtgtcatgaaggggtt
tgcattgggtgtgagtggcatccactggaacaaagtaaagttgcaacatgtggttgggat
ggcttgattaagtactgggactag
DBGET
integrated database retrieval system