Citrus x clementina (clementine): CICLE_v10031056mg
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Entry
CICLE_v10031056mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10990
RecQ-mediated genome instability protein 1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
CICLE_v10031056mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10031056mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
CICLE_v10031056mg
FA (Fanconi anemia) pathway
CICLE_v10031056mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
DUF538
SecA_DEAD
BLM_N
Motif
Other DBs
NCBI-GeneID:
18044315
NCBI-ProteinID:
XP_006436881
UniProt:
V4TK18
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MPRRRLRLHSSSDSEEEAPNHQQSSRQQSTVTDPPVNLSTPNPNPNSNPNTDPFTIPLDD
DDDDYYFTPPSPDRTTGSPISDSLLRLGLSLKREWLDSCVQGLESSVSGFSQLDVSAKAK
LCFQQFLFSDMNYSGAGLLPRNVQSMHLVDLKGPFVLQVDEVINISCPLRGRYQDAAPGI
KRCLKLSMTDGVQRVFGMEYRPIKDLKVLAPSGFKVVICNVHIRHGLFMLVPEAIEVLGG
MVQELDAARQRLINEINKPPRGKRTRTGVVPSLATRATLAAWPSNGVRVTERGSNLPSQN
ATPIQENEQGANSVASGINTQRPTVGPINEEHAVPNSSSNVFMDYEDMHHDTIPIGRDNT
MPSSNNNVALDIEDTVMVNEVEDNIMVNEVEDTIMVDEVEHPLILSRDREIPFTYLASLS
AKWAATNGKAHSVQGKIKCFLTGVKRFQYKGRETYELLVYVDDGSLISEILIDHNVVQKG
IGHSPQEVTAALSSSDLKKVIDMKEIFRQFQLFLVDFEGTMLIEMSDKSPHPIALEITQG
CPSSDAWLLLRRLNSSPSVNAQTPPRRPMDPHPPMDPIEISP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaagacgcctcagactccacagctcttccgattcagaagaagaagcgccaaat
catcagcaaagtagtcgccaacaatctactgtcactgacccgcctgtcaatttatcaact
cctaaccctaaccctaactctaacccgaatactgatccctttacaatccctctcgacgac
gacgacgacgactactacttcacgccgccgtcaccggaccgaaccaccggttctccgatt
tcagactctctattgagactcgggttaagcctcaagagagagtggttggattcttgtgtt
cagggtcttgagagttctgtttcgggattctcacaactcgatgtgtcggcaaaagctaag
ctttgttttcagcagttcttgttctctgatatgaactactccggcgccggcttgcttccg
cgaaatgtgcagtctatgcatttggtcgatctcaagggaccctttgttttgcaggttgac
gaggtaattaatatcagctgtcctctaagaggcaggtatcaggatgcggcccctgggatc
aaaaggtgcctcaagttgtccatgacagatggtgttcaacgcgtgtttggcatggaatac
aggccaatcaaagatctcaaagttttggctccttcaggatttaaggttgtcatctgtaat
gtacatatacggcatggactgttcatgttggttcctgaagctattgaagttctaggagga
atggtgcaggaactggatgctgcaaggcagcgtctcattaatgaaataaacaagccgccc
cgaggaaaaaggacaaggacaggagtggttccttctttagcaactagagctactcttgct
gcgtggccatcaaatggtgttcgtgttactgagcgcggcagtaatttaccatcacaaaat
gcaactcctatccaggaaaatgagcaaggtgctaattcggttgcatctggcattaacact
caaagacctacagttggtcccatcaatgaggagcatgctgttcctaattcatcatctaat
gttttcatggattatgaggatatgcatcatgataccattccaattggaagagataatacc
atgcctagttcaaacaataatgttgcattggatattgaggatactgtcatggttaatgag
gttgaggataacatcatggttaatgaggttgaggataccatcatggttgatgaggttgaa
catccactcattttatctagagaccgtgaaatccctttcacttacttggcaagtttgtca
gctaagtgggctgccactaatgggaaagcccattctgttcaggggaaaattaagtgcttt
ctgactggtgttaagcgattccaatataaagggagggaaacgtatgagcttttggtttat
gttgatgatggcagcctcatctctgagatacttattgatcacaatgttgtacagaaagga
ataggtcattctccccaggaagtaactgccgctctttcctcttcggatctgaagaaagtt
attgatatgaaggagatttttaggcagttccagttattcttagtggattttgagggcaca
atgcttatagagatgagcgacaaatctcctcatccaattgctcttgagattacccagggc
tgtccttcatcagatgcgtggttacttttgagaagactcaattcctctccttctgttaat
gctcagactccgccacgccgccccatggatccccatcctccaatggatcccattgagata
tccccttga
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