Citrus x clementina (clementine): CICLE_v10031184mg
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Entry
CICLE_v10031184mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03410
Base excision repair
cic03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CICLE_v10031184mg
03450 Non-homologous end-joining
CICLE_v10031184mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10031184mg
Enzymes [BR:
cic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CICLE_v10031184mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
CICLE_v10031184mg
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
CICLE_v10031184mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
HHH_5
IMS_HHH_1
Cdd1
IMS_HHH
PTCB-BRCT
NTP_transf_2
BRCT_2
LIG3_BRCT
DNA_pol_E_B
Motif
Other DBs
NCBI-GeneID:
18045197
NCBI-ProteinID:
XP_006438473
UniProt:
V4SV18
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MAPKTTRKPTPALDSNGIFAGMRVFLVEKGVQNRRLQIWRQKLVQMGASVEEKLSKKVTH
VLAMDLEALLQQVSKQHLARFKGSVIRYQWLEDSLRLGEKVSEDLYRIKLDPEGEKIVDR
VLSQIQGNGNTSSDGESSHRKKIKSSTEDVEHFKAESKGDAETNALSEPSNSPMSSESLT
NTLSTASASPDFSSHHITDPSLLYNPPDLNKNITEIFGKLINIYRALGEDRRSFSYYKAI
PVIEKLPFKIESADQVKGLPGIGKSMQDHIQEIVTTGKLSKLEHFEKDEKVRTISLFGEV
WGIGPATAQKLYEKGHRTLDDLKNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQK
AGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFLSKYVKKLKEMKFLREDL
IFSTHSEEVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQG
VRARTSLKFDTEKEVFDFLGFPWLEPHERNL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaaacaaccagaaaaccaactccagctcttgactcgaacggtatattcgcc
ggaatgcgcgttttcttagtcgaaaagggagttcaaaaccgtcgattacagatttggagg
cagaagctggtgcaaatgggggcttccgttgaggagaagctatccaagaaagtcacgcat
gttttagcgatggatttagaagcgcttcttcaacaagtcagtaaacaacacctcgcacgc
ttcaaaggaagtgttatccgttatcaatggctggaggacagcttgagattaggggaaaag
gtctctgaggatttgtatcgtataaaactggatccagaaggagaaaagatagtagacagg
gtcttgagtcaaatacaaggaaatggaaatacttcaagtgatggtgaatcatctcatcgg
aaaaagatcaaatcctctactgaggacgtggaacacttcaaagcagaaagcaagggagat
gcggaaaccaatgctctatctgagccatcgaatagtcccatgagttctgaaagtttgact
aacactctgagcactgcaagtgccagtccagatttctccagtcatcatattacggatcca
tccctgctgtacaatccacctgatttaaacaagaatatcactgagatatttggaaagctt
atcaacatatatagggcactgggtgaggatcggagatcatttagctactacaaggctatt
ccagttattgagaagttaccatttaaaattgaaagtgcagatcaggttaaaggcctgcca
gggattggaaagtcaatgcaggatcatattcaggagatcgtaactactgggaaattatca
aagttggagcactttgaaaaggatgaaaaggtacggacaatcagtttgtttggggaagtt
tggggtattggtcctgcaactgcacagaaattatatgagaaaggacaccgtacactagat
gatttgaagaatgaagattcattaacacattctcagagattaggtttgaaatatttcgat
gacattaagacgaggattccacgccacgaggttgagcagatggaacgtcttctgcagaaa
gccggggaagaagttttgcctgaggtgatcattttgtgtggaggatcatacagacgtgga
aaggcttcctgtggagatctagatgttgtaattatgcatcctgatagaaaaagtcataag
ggtttcttgtcaaaatatgtgaagaagttaaaggaaatgaagttcttaagagaggatttg
attttcagcactcacagcgaggaggtgtatccaagggacatatatgcgtttgggctaata
gcatggaccgggaatgatgtactaaacaggaggttgagattactagcagaatccaaagga
taccgacttgatgatacagggctgtttccagctacttatggctcaggcggtaaacagggt
gtaagggcgagaacaagtttgaaatttgatactgaaaaggaggtgtttgatttcctggga
tttccttggctagaacctcatgaaagaaatttgtga
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integrated database retrieval system