KEGG   Citrus x clementina (clementine): CICLE_v10031184mg
Entry
CICLE_v10031184mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03410  Base excision repair
cic03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CICLE_v10031184mg
   03450 Non-homologous end-joining
    CICLE_v10031184mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10031184mg
Enzymes [BR:cic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CICLE_v10031184mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     CICLE_v10031184mg
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     CICLE_v10031184mg
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 BRCT HHH_5 IMS_HHH_1 Cdd1 IMS_HHH PTCB-BRCT NTP_transf_2 BRCT_2 LIG3_BRCT DNA_pol_E_B
Other DBs
NCBI-GeneID: 18045197
NCBI-ProteinID: XP_006438473
UniProt: V4SV18
LinkDB
Position
Unknown
AA seq 511 aa
MAPKTTRKPTPALDSNGIFAGMRVFLVEKGVQNRRLQIWRQKLVQMGASVEEKLSKKVTH
VLAMDLEALLQQVSKQHLARFKGSVIRYQWLEDSLRLGEKVSEDLYRIKLDPEGEKIVDR
VLSQIQGNGNTSSDGESSHRKKIKSSTEDVEHFKAESKGDAETNALSEPSNSPMSSESLT
NTLSTASASPDFSSHHITDPSLLYNPPDLNKNITEIFGKLINIYRALGEDRRSFSYYKAI
PVIEKLPFKIESADQVKGLPGIGKSMQDHIQEIVTTGKLSKLEHFEKDEKVRTISLFGEV
WGIGPATAQKLYEKGHRTLDDLKNEDSLTHSQRLGLKYFDDIKTRIPRHEVEQMERLLQK
AGEEVLPEVIILCGGSYRRGKASCGDLDVVIMHPDRKSHKGFLSKYVKKLKEMKFLREDL
IFSTHSEEVYPRDIYAFGLIAWTGNDVLNRRLRLLAESKGYRLDDTGLFPATYGSGGKQG
VRARTSLKFDTEKEVFDFLGFPWLEPHERNL
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggcgccaaaaacaaccagaaaaccaactccagctcttgactcgaacggtatattcgcc
ggaatgcgcgttttcttagtcgaaaagggagttcaaaaccgtcgattacagatttggagg
cagaagctggtgcaaatgggggcttccgttgaggagaagctatccaagaaagtcacgcat
gttttagcgatggatttagaagcgcttcttcaacaagtcagtaaacaacacctcgcacgc
ttcaaaggaagtgttatccgttatcaatggctggaggacagcttgagattaggggaaaag
gtctctgaggatttgtatcgtataaaactggatccagaaggagaaaagatagtagacagg
gtcttgagtcaaatacaaggaaatggaaatacttcaagtgatggtgaatcatctcatcgg
aaaaagatcaaatcctctactgaggacgtggaacacttcaaagcagaaagcaagggagat
gcggaaaccaatgctctatctgagccatcgaatagtcccatgagttctgaaagtttgact
aacactctgagcactgcaagtgccagtccagatttctccagtcatcatattacggatcca
tccctgctgtacaatccacctgatttaaacaagaatatcactgagatatttggaaagctt
atcaacatatatagggcactgggtgaggatcggagatcatttagctactacaaggctatt
ccagttattgagaagttaccatttaaaattgaaagtgcagatcaggttaaaggcctgcca
gggattggaaagtcaatgcaggatcatattcaggagatcgtaactactgggaaattatca
aagttggagcactttgaaaaggatgaaaaggtacggacaatcagtttgtttggggaagtt
tggggtattggtcctgcaactgcacagaaattatatgagaaaggacaccgtacactagat
gatttgaagaatgaagattcattaacacattctcagagattaggtttgaaatatttcgat
gacattaagacgaggattccacgccacgaggttgagcagatggaacgtcttctgcagaaa
gccggggaagaagttttgcctgaggtgatcattttgtgtggaggatcatacagacgtgga
aaggcttcctgtggagatctagatgttgtaattatgcatcctgatagaaaaagtcataag
ggtttcttgtcaaaatatgtgaagaagttaaaggaaatgaagttcttaagagaggatttg
attttcagcactcacagcgaggaggtgtatccaagggacatatatgcgtttgggctaata
gcatggaccgggaatgatgtactaaacaggaggttgagattactagcagaatccaaagga
taccgacttgatgatacagggctgtttccagctacttatggctcaggcggtaaacagggt
gtaagggcgagaacaagtttgaaatttgatactgaaaaggaggtgtttgatttcctggga
tttccttggctagaacctcatgaaagaaatttgtga

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