Citrus x clementina (clementine): CICLE_v10031289mg
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Entry
CICLE_v10031289mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10031289mg
Transcription machinery [BR:
cic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CICLE_v10031289mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
18044589
NCBI-ProteinID:
XP_006437403
UniProt:
V4SS73
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP
SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE
KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQNGSKQL
RSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPS
MEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGLI
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRL
EEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADNR
VENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRER
VRQVGLVALEKLKHAARKKKMEAMLVKH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgatggccacagctgctgttattggacttagcgctggcaagaggctcttgagttcttca
ttttactattctgatatctcggaaaaattctcatatatcaatgatcttggatctgcaaac
tctcaagttggttcaactaagaatgtggtagctgccaagaagtcatcaaattataatcca
agctttccatcatcgaatcgacaaactcagcctattaaggctctcaaagaacatgtggat
actaattttgcttctactgcagagccatgggctgaaccaccaaacagcatagaagaggaa
agctctgagcttgactattcagtggaggcacttcttttgcttcagaagtctatgctcgaa
aagcaatggaatctttcttttgagagaacagttttaactgattcaccgagtaagaaaact
cacaagaaggtgccggtcacttgctctggtgtatctgctcggcaacgaagattgaattct
aaaaagaaaatattaagccagaataaatctgttctccaacagaatggctccaagcagcta
agatcaatgattagtccggaactaattcagaatcatctaaagggctatgtgaagggtgtg
gtaagtgaagagctgctcacccatgccgaagttgtgcgtctatcaaagaaaattaaaact
ggcctttccttggatgatcataaattgagattgaaggagaggttggggtgtgagccatca
atggaacaacttgcagcttccttgaggatttctcgtcctgagttacagtcaatattgatg
gagtgttcgttggcaagagagaagctggtgatgagcaatgttcgtttggtcatgtctata
gctcaacgatatgataacatgggtgccgacatggctgacctcattcagggtggattgatt
ggattattgcgtgggattgagaaatttgattcttcaaagggtttcaaaatttcaacttat
gtgtattggtggatacgccagggtgtttctagagcattagttgagaattcaagaacctta
agattgcctaatcatctgcatgaaaggttaggcttgatccggaatgcaaagcttaggcta
gaagagaaaggagtaacaccagcagttgatagaattgcagaatacttaaatatgtcccag
aagaaagtcagaaacgcgacagaggcaattggcaaggtcttctcacttgatagggaggca
ttcccctctttaaatggcctcccaggagaaacccatcatagttacattgcggataatcgc
gtggagaacaacccgtggcatggagtagatgattgggctctcaaggatgaagtaaacaag
ctcatcatagtgacacttggagaacgtgagagagagatcatacgtctttactatggtctt
gacaaggaatgtcttacgtgggaggatataagcaaacgtataggtttgtcccgagaaaga
gttaggcaagttggacttgtggcactagagaaactaaaacatgccgcgaggaagaaaaag
atggaggccatgcttgtgaaacattag
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