Citrus x clementina (clementine): CICLE_v10031337mg
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Entry
CICLE_v10031337mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10031337mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CICLE_v10031337mg
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
18044292
NCBI-ProteinID:
XP_006436523
UniProt:
V4SPP8
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MLLNTCILLECLFFLIFSSSATISSLNLTLPHQHPDPDAVAQDVQRRVNVSLSRRQALAI
NAQCQTGNPIDDCWHCDPNWAANRQRLADCSVGFAQGTLGGKGGQIYVVTDSSDSDPANP
TPGTLRHAVIQTEPIWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYVS
HVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGL
IDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRR
GYIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNAKEVTKRVETDESEWAGWNW
RTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAGVFGGPRDDEGEGNS
YPGFSGGGSGSGGTNRNNGDGDFFGMVFGSGASRLPPPSPSTSIFLSLLIILILYTITNH
DAPLSLQLLLL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcttctaaacacctgcattctcttagaatgcctcttcttcctcattttctcctcttct
gctacaatttcttccctcaatctcactttaccccatcagcatcctgaccctgacgctgtt
gctcaagatgtgcaaaggagagttaatgtatctctatcaagaagacaagcgctcgccatt
aacgcccaatgccaaaccggaaaccccatcgacgactgctggcactgcgacccaaactgg
gcagcaaaccggcaacggttagccgactgcagcgtcggcttcgcccaaggtaccctcggc
ggcaaaggcggccagatctacgtcgtcaccgactcctccgacagcgacccggcgaacccc
acgccgggcaccctccgccacgccgtcatccaaacggaacccatctggatcaccttcgcc
tccaacatgctcatcaagctcaaacacgagctcatcatcaacagctacaaaaccatcgac
ggccgcggcgccaacgtcgaaatcaccggcaacggctgcctgacgctccagtacgtgtcc
cacgtcatcatccacaacgtccacatccaccactgcaagccctcggggaacacgatgatc
gcctcgtcgccgacccacgtcgggtaccggggcaagtcggacggtgacgggatctccata
ttcggctcgcagaagatatgggtggatcactgctcgctgagctactgcaccgacgggctg
atcgacgcgataatggggtccacggggataacgatctccaacaattatttctcgcaccac
aatgaggtgatgctgctggggcacaacgacaagtacgcgctcgatatggggatgcaagtt
accattgcgtttaaccacttcggtgtggcgctggtgcagcgaatgccacggtgccggcgc
gggtacatacacgtggtcaataatgacttcacctcatgggaaatgtatgctattggcggt
agcgcgaaccccaccattaacagtcaagggaatcgctacaccgctccgcccgatgataat
gccaaagaggtgacgaagcgcgtggagacagacgagagtgagtgggcgggctggaattgg
aggacggagggggacgtaatggtaaatggggcattctttgtgccgtcaggcgtggggctc
agcacgcagtacgcaaaggcctcgagtgttgagcccaaatcagccgccctcatcgaccgg
ctgaccatgaacgccggcgtcttcggtgggcccagggatgatgaaggggagggcaactct
tatcccggattcagcggcggtgggtccggcagcggcggcaccaaccgcaacaacggtgat
ggcgacttctttggaatggtattcgggagcggcgcgtcgcggctcccaccaccctctcct
tcaacctcaatctttttgtctcttctaattattttgattttgtacactatcaccaaccat
gatgctccattatcattacaattattattgttatag
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