Citrus x clementina (clementine): CICLE_v10031429mg
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Entry
CICLE_v10031429mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10031429mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CICLE_v10031429mg
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18044171
NCBI-ProteinID:
XP_006438176
UniProt:
V4TNK2
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MVDNCVVYTWLIFLSEKDEELLLAAETSTMGPLRSRNQLSHTCIHPLHSPLYFIFFPSRE
KVREIEQMAIPLLLWLLLCLLAPTFISSSPVQDPELVVEEVHKSINASRRSLGFLSCGTG
NPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRY
AVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGI
NIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGS
TAITISNNYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN
NDYTHWEMYALGGSASPTINSQGNRFVAPNDRFNKEVTKYEDAPESEWKNWNWRSEGDLM
VNGAFFTPSGAGASSSYAKASSLGARPSSLISSITAGAGSLNCRKGKPC
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtagacaattgtgtggtgtatacgtggctgattttcctttcagagaaagacgaggaa
ttattactagcggccgaaactagcacaatgggaccccttaggagtagaaaccaactttcc
catacttgtatccatccactccactctcccctttacttcattttctttcctagcagagag
aaagtgagagagattgaacaaatggcaattccactcttgctttggttgctcttgtgcctt
ttagctccaaccttcatttcctcttcaccagttcaagatcctgaattagtagtggaagaa
gtacacaaaagcatcaatgcgtctaggaggagtttggggtttctgtcgtgtgggaccggc
aatccgatcgacgactgctggcggtgtgacccgaagtgggaagagaaccggcagcagcta
gcggattgcgccatcgggttcggcaagcaggccattggtgggaaagatggtaagatatat
gttgttacggactccggtgacgatgacccagtgaacccaaagccaggcactctgaggtat
gctgtgatccaagacgagcccctatggatcattttcgcacgtgacatggtgatcacattg
aaagaggagttgatcatgaactcgttcaagaccatcgacggccgaggagcgagcgtacac
atagccggtggtccatgcattactatccagtacgtgaccaacatcattattcatgggatt
aatatacatgactgtaagagaggaggcaacgctaacgtgcgggactcaccaagtcactac
gggtggaggactatatcggacggcgatggtgtatccatctttggtggaagccacgtgtgg
gttgatcattgctctttgtctaattgcaacgatgggttgatcgatgccattcatggatcc
acagccatcacaatctcaaacaattacatgacccaccataacaaagtgatgcttctgggc
cacagtgatacttttactcaggacaagaacatgcaagttacgattgctttcaatcacttt
ggtgaagggcttgtgcaaagaatgccaagatgtagacatgggtattttcatgtagtgaac
aacgactacacacattgggagatgtatgcgctcggtgggagtgcttctcctacaattaac
agccaagggaatagatttgttgctccaaatgatagattcaacaaagaggtgactaaatat
gaggatgcgccggagagtgaatggaagaattggaattggaggtccgaaggggatttgatg
gtaaatggtgcattttttacgccatcgggtgccggcgcatcttctagttatgctaaggct
tcaagtttaggagcaagaccatcttcactaataagttcaatcacagcaggagcgggctcg
cttaattgcaggaaaggcaagccttgctag
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